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Recipe: Mutate Random 1.0.2
Created by Rav3n_pl 79 1423
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Used 496 times with an average impact of -8 points.

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Name: Mutate Random 1.0.2
ID: 9681
Created on: Sun, 08/29/2010 - 16:12
Updated on: Thu, 09/02/2010 - 17:30
Description:

Mutates randomly around protein. Size and clash importance of mutating area are also random. If you break it just load save 3 - best solution found.



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Joined: 06/17/2010
warnig

This script is never ending loop!
This script not accepting loses :)
If it say "gain:0" it means it get less than 0.001 pt.
After you break it (and you will) load save 3 to get best saved solution.

How it works:
- randomize segment
- randomize sphere size
- randomize clash importance
- mutate sphere
- select larger sphere
- clash to 1
- shake/wiggle sphere
- wiggle entire protein
- check score
- repeat above ;]

Joined: 06/17/2010
update

- now it makes 2*segment count loops (ie 200 loops for 100sg protein).
- changed way to wiggle/shake after mutate
- changed way to calculate large sphere size (small is still random 1-7)
- added more output

Try it in different lingard positions :)

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons