Back to Recipes Homepage
recipe picture
Recipe: Set SS
Created by LociOiling 9 4
Your rating: None Average: 3.7 (3 votes)


Name: Set SS
ID: 49161
Created on: Mon, 05/19/2014 - 15:58
Updated on: Mon, 05/19/2014 - 22:58

Sets secondary structure. For use with Get SS or similar. Replace the ssList variable with the output from Get SS or similar recipes.

Best For


LociOiling's picture
User offline. Last seen 21 min 50 sec ago. Offline
Joined: 12/27/2012
Groups: Beta Folders
Other options

After releasing this quick and dirty recipe, it turned out Brow42 had created something better a long time back. Brow's version of the recipe displays the primary and secondary structures, and lets you change them right in the recipe dialog. This is a lot better than my initial approach, which requires running one recipe to write out the structures, editing the scriptlog file to save the results, and running another recipe to restore the structures.

See "AA Copy Paste Compare v 1.1.1 -- Brow42" for a full-function recipe that works with both primary and secondary structure.

I created "SS Edit" as simpler version of Brow's recipe, that works only with secondary structures in a single dialog box.

Want to try?
Add to Cookbook!
To download recipes to your cookbook, you need to have the game client running.



Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons