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Recipe: MicroIdealize 1.0
Created by spvincent 59 35
4.49231
Your rating: None Average: 4.5 (65 votes)

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Name: MicroIdealize 1.0
ID: 48411
Created on: Mon, 03/03/2014 - 18:25
Updated on: Mon, 03/03/2014 - 18:25
Description:

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spvincent's picture
User offline. Last seen 19 hours 50 min ago. Offline
Joined: 12/07/2007
Groups: Contenders
Intended as an endgame script

Intended as an endgame script to be used at high WP but may be more generally applicable now Ideality has assumed more importance.

Algorithm outline

For each section (default length 3) in the selected range (default = whole protein)
    Isolate that section with cut points (prevents the structure from blowing apart)
    Idealize the section
    Close cutpoints
    Wiggle
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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons