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Recipe: 835_Bruteforce_AA's
Created by robgee 5 13
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Name: 835_Bruteforce_AA's
ID: 47884
Created on: Wed, 01/22/2014 - 15:50
Updated on: Wed, 01/22/2014 - 23:50
Description:

BruteForces 1331 hydrophobic AA combinations for puzzle 835



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robgee's picture
User offline. Last seen 4 hours 33 min ago. Offline
Joined: 07/26/2013
Puzzle 835 only

For puzzle 835 only.
Tries all 11 hydrophobic AminoAcids for all 3 segments, 1331 permutations.
It just does a straight swap, no shake nor wiggle.
Only uses save/restore recent best.
It is a bit brutal.
Takes @10mins on a cpu with 2670 rating on cpubenchmark.

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons