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Recipe: Bridge Wiggle v 1.1.0.1 - Brow42 TvdL
4.4
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Name: Bridge Wiggle v 1.1.0.1 - Brow42 TvdL
ID: 44053
Created on: Wed, 08/29/2012 - 07:21
Updated on: Wed, 08/29/2012 - 14:21
Description:

Randomly wiggle cysteines with bands to improve bridge score. Also band them to form the bridges in the first palce. Auto detects close pairs. Keeps existing bands intact.



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Joined: 09/21/2011
Groups: Void Crushers
Keeps existing bands

Just a quick hack. Added bandsaving module and an option to disable existing bands while the script is running.

Tip: If you have banded the cystine sidechains make sure that those are disabled or are not strong.

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons