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Recipe: QuakeR 2.51

Created by Rav3n_pl 70 1873

Your rating: None Average: 4.8 (46 votes)

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Name:	QuakeR 2.51
ID:	15698
Created on:	Thu, 11/11/2010 - 03:16
Updated on:	Sun, 03/13/2011 - 13:15
Description:	QuakeR - a randomized Quake. Options at end.

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Thu, 11/11/2010 - 11:20

#1

Rav3n_pl 70 1873

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Joined: 06/17/2010

Groups: Anthropic Dreams

Changes

- random seed is using fractions form score, so just wiggle sidechains if you totally stuck and want to start over
- after pulling is started qStab, then if score is close to best PinkFuze (quadriple fuze form CG303 GAB III) is started

All options described at end of script.

Sun, 11/14/2010 - 20:54

#2

Rav3n_pl 70 1873

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update

- added save recent best (sometimes it misses fractions from last pulling)
- changed output (less)
- 50 iters by default

If you stuck, b4 you start it again wiggle sidechains to randomize bands order.

Sun, 11/21/2010 - 10:33

#3

Rav3n_pl 70 1873

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.1

fixed score issue

Mon, 12/13/2010 - 18:08

#4

Rav3n_pl 70 1873

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Joined: 06/17/2010

Groups: Anthropic Dreams

2.4

- changed qStab to be more "qFuze"
- default pulling CI is 0.9 - less deformation, faster needed loss
- code is more readable in client editor ;] (removed X-es)

Sat, 01/15/2011 - 01:50

#5

Rav3n_pl 70 1873

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2.5

- added "remember" of last strength of bands to start with on next pull (first pull is always form 0.1)
- added optional max band strength
- cleaned code a little (mostly in math and random)
- wiggles are always (2) shake is (1)
- lower default doFuze (from 10 to 5) - fuze is started only if we 5pts or less close to best score

It should be pretty faster now :)

Tue, 05/21/2013 - 16:26

#6

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Joined: 05/14/2013

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A must have recipe

This is brilliant. Works like a dream.


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	Parent QuakeR 2.1 by Rav3n_pl 70 1873


	Children QuakeR 2.2 - 350 maxloss2, QuakeR 2.2 - 350, QuakeR 2.3 - 400, QuakeR 2.5_350 by queentut 70 1873 QuakeR 2.2 350 nopasaran, QuakeR 2.3 Garnier 250-5-1-15, QuakeR 2.3 Garnier 400, QuakeR 2.3 400 Garnier, QuakeR 2.3.1 150-1.5 nopasaran, QuakeR 2.3.1-50-1.75 Garnier, QuakeR 2.3.1 50-1.5 Garnier, QuakeR 2.3.1-200-1.75 garnier, QuakeR 2.3.1 50-2 garnier, QuakeR 2.3.1 50-1.5-2 garnier, QuakeR 2.4 200-1.5 Garnier, QuakeR 2.4 150-1.75 Garnier, QuakeR 2.5-200-1 Garnier, QuakeR 2.5-50-1.5 Garnier, QuakeR 2.5 garnier 200 - 10 by Ch Garnier 70 1873 QuakeR 2.2_150_5%, QuakeR 2.2_150_5%, QuakeR 2.3_150it_1.5, QuakeR 2.4_250_15%, QuakeR 2.3_250_15%, QuakeR 2.4_500_10% by xbytewalker 70 1873 QuakeR 2.2 Custom by davidla 70 1873 testQuakeR 2.3 by CharlieFortsCon... 39 76 QuakeR 2.2 -vx1, QuakeRSB 2.3.1-350-mod, SCB QuakeR 2.4-MUT, SCB QuakeR 2.4 Random loss, QuakeR 2.4 RND-CI, SCB QuakeR 2.5.c by Steve001 70 1873 QuakeR 2.3 by lanmy 70 1873 QuakeR 2.3.1, QuakeR 2.3Long by mkurcinski 70 1873 QuakeR 2.3high, QuakeR 2.3min by purpletatoe 70 1873 testQuakeR 2.3, testQuakeR 2.3 by FoldPrefect 70 1873 QuakeR 2.3.1 by Kit Cosby 70 1873 QuakeR 2.3.1 f by prot-bustr 70 1873 QuakeR 2.2_1000, QuakeR 2.3.1_1000, QuakeR 2.3.1_1000, QuakeR 2.3.1_1000, QuakeR 2.3.1_1000, QuakeR 2.3.1_1000, QuakeR 2.4_10000, QuakeR 2.4_10000, QuakeR 2.3.1_pull, QuakeR 2.3.1_mod by FoxyLady 70 1873 FC QuakeR 2.4, FC QuakeR 2.4, _FC QuakeR 2.5 by fishercat 70 77 QuakeR 2.4 mod, QuakeR 2.5 5000, QuakeR 2.4 5000, QuakeR 2.4 5000, QuakeR 2.4 exp5r, QuakeR 2.4 EXP NEW by rsosborne 70 1873 QuakeR 2.4 - forever by scottyler89 70 1873 QuakeR 2.4 by DC1600 70 1873 QuakeR 2.4 long by bareego 70 1873 QuakeR 2.4 1000 0.5%, QuakeR 2.4 1000, QuakeR 2.4 1000 0.25%, QuakeR 2.5 1000 0.5%, QuakeR 2.5 1000, QuakeR 2.5 1000, QuakeR 2.5 1000 0.25%, QuakeR 2.5 1000 0.1%, QuakeR 2.5 1000 0.1%, QuakeR 2.5 10000, QuakeR 2.2 10000 2 by Ignacio 70 1873 QuakeR 2.4 semi-infinite by Fjoelsvider 70 1873 QuakeR 2.4x, QuakeR 2.4x, QuakeR 2.4a1, QuakeR 2.51 a, QuakeR 2.51 a by johnmitch 70 14 QuakeR 2.5 by Darkknight900 70 1873 QuakeR 2.4X 5000 by Popijon 70 1873 QuakeR 2.5 infi mut, QuakeR 2.5 inf by oberburgermeister 70 1873 QuakeR 2.4 am by Miedzix 70 1873 kim QuakeR 2.5, Kim QuakeR 2.5, kim QuakeR 2.51, kim QuakeR 2.51, kim QuakeR 2.51 by krulon 70 1873 QuakeR 2.3 x, QuakeR 2.51p by SKSbell 70 1873 QuakeR 2.51, QuakeR 2.52, QuakeR 2.51 by phi16 11 30 QuakeR 2.5 1000, QuakeR 2.5 OO by Dj-P 70 1873 QuakeR 2.51 - S by sotk 70 1873 QuakeR v3.0 by Rav3n_pl 70 1873 QuakeR 2.51.1, QuakeR 2.51.wld333, QuakeR 2.51.2, QuakeR 2.51.5, QuakeR 2.51 lite for 425, QuakeR 2.51 5000, QuakeR 2.51 thresh 5, QuakeR 2.51, QuakeR 2.51 thresh 5, QuakeR 2.51 thresh 1 by wld333 70 1873 QuakeR Exploration puzzle by QuakeR 2.4 by BitSpawn 70 1873 QuakeR 2.4 A by SabineA 70 1873 QuakeR 2.51 test by glaciall 70 1873 QuakeR 2.3.1-expl by foldithl1 70 1873 QuakeR 2.51a by colsmeghead 70 1873 QuakeR 2.51my, QuakeR 2.51s by kot 70 1873 QuakeR 2.51, QuakeR 2.51 999 by a bunny 70 1873 QuakeR 2.51 fuze by cynthb 70 1873 QuakeR 2.51 - Inc by Incongruous 70 1873 QuakeR 2.51 by FlapjackFury 70 1873 QuakeR 2.51 (modified), QuakeR 2.51 maxBS=0.7, QuakeR 2.51 (modified) by doug.ehlert 70 1873 my quaker by brow42 70 1873 QuakeR 2.51 - 2 by tarriel 70 1873 QuakeR 2.51 pull hard by pfirth 70 378 QuakeR 2.51 - 2 by Gold128 70 1873 QuakeR 2.51! by Azolo 70 1873 QuakeR 2.51 edmod by Phillip J Fold 70 1873 QuakeR 2.51x by ourtown 70 1873 QuakeR 2.51 -myopts by Unleashd 70 1873 QuakeR 2.51 - edit by tokens 70 1873 QuakeR 2.51 by malthreSC 70 1873 QuakeR 2.51, QuakeR 2.51 - 10 by Close At Hand 70 1873 QuakeR 2.51 - 500 by Lemon Friend 70 1873 QuakeR 2.51 - 200 Loops by JackWeaver 70 1873 03 - QuakeR 2.51, 03 - QuakeR 2.51 by kitek314_pl 70 1873 QuakeR 2.51.1 by Unseen98 70 1873 QuakeR 2.51 - harder, QuakeR 2.51 - more fuze, QuakeR 2.51 0.75, QuakeR 2.51 More by Mark A 70 1873 QuakeR 2.52 by OmniDude 70 1873 QuakeR 2.51 - edit by m9710797 70 1873 QuakeR 2.51 50mill by petr2 70 1873 gw - QuakeR 2.51 by gitwut 70 1873 QuakeR 2.51 500 by Bjro 70 1873 QuakeR 2.51 (short) by Hiro Protagonist 70 1873 QuakeR 2.51.2 by fenncruz 70 1873 Quake pmd by pmdpmd 70 1873 QuakeR 2.51 500 tries by goldfish80 70 292 QuakeR 2.51, moe by ivalnic 70 628


	Authors Rav3n_pl 70 1873

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, Boehringer Ingelheim, RosettaCommons