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Recipe: QuakeR 2.51

Created by Rav3n_pl 142 853

Your rating: None Average: 4.8 (46 votes)

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Name:	QuakeR 2.51
ID:	15698
Created on:	Thu, 11/11/2010 - 03:16
Updated on:	Sun, 03/13/2011 - 13:15
Description:	QuakeR - a randomized Quake. Options at end.

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Thu, 11/11/2010 - 11:20

#1

Rav3n_pl 142 853

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Groups: Anthropic Dreams

Changes

- random seed is using fractions form score, so just wiggle sidechains if you totally stuck and want to start over
- after pulling is started qStab, then if score is close to best PinkFuze (quadriple fuze form CG303 GAB III) is started

All options described at end of script.

Sun, 11/14/2010 - 20:54

#2

Rav3n_pl 142 853

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update

- added save recent best (sometimes it misses fractions from last pulling)
- changed output (less)
- 50 iters by default

If you stuck, b4 you start it again wiggle sidechains to randomize bands order.

Sun, 11/21/2010 - 10:33

#3

Rav3n_pl 142 853

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.1

fixed score issue

Mon, 12/13/2010 - 18:08

#4

Rav3n_pl 142 853

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2.4

- changed qStab to be more "qFuze"
- default pulling CI is 0.9 - less deformation, faster needed loss
- code is more readable in client editor ;] (removed X-es)

Sat, 01/15/2011 - 01:50

#5

Rav3n_pl 142 853

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2.5

- added "remember" of last strength of bands to start with on next pull (first pull is always form 0.1)
- added optional max band strength
- cleaned code a little (mostly in math and random)
- wiggles are always (2) shake is (1)
- lower default doFuze (from 10 to 5) - fuze is started only if we 5pts or less close to best score

It should be pretty faster now :)

Tue, 05/21/2013 - 16:26

#6

SallyT 142 5385

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A must have recipe

This is brilliant. Works like a dream.


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	Parent QuakeR 2.1 by Rav3n_pl 142 853


	Children QuakeR 2.2 - 350 maxloss2, QuakeR 2.2 - 350, QuakeR 2.3 - 400, QuakeR 2.5_350 by queentut 142 5385 QuakeR 2.2 350 nopasaran, QuakeR 2.3 Garnier 250-5-1-15, QuakeR 2.3 Garnier 400, QuakeR 2.3 400 Garnier, QuakeR 2.3.1 150-1.5 nopasaran, QuakeR 2.3.1-50-1.75 Garnier, QuakeR 2.3.1 50-1.5 Garnier, QuakeR 2.3.1-200-1.75 garnier, QuakeR 2.3.1 50-2 garnier, QuakeR 2.3.1 50-1.5-2 garnier, QuakeR 2.4 200-1.5 Garnier, QuakeR 2.4 150-1.75 Garnier, QuakeR 2.5-200-1 Garnier, QuakeR 2.5-50-1.5 Garnier, QuakeR 2.5 garnier 200 - 10 by Ch Garnier 142 5385 QuakeR 2.2_150_5%, QuakeR 2.2_150_5%, QuakeR 2.3_150it_1.5, QuakeR 2.4_250_15%, QuakeR 2.3_250_15%, QuakeR 2.4_500_10% by xbytewalker 142 5385 QuakeR 2.2 Custom by davidla 142 5385 testQuakeR 2.3 by CharlieFortsCon... 12 20 QuakeR 2.2 -vx1, QuakeRSB 2.3.1-350-mod, SCB QuakeR 2.4-MUT, SCB QuakeR 2.4 Random loss, QuakeR 2.4 RND-CI, SCB QuakeR 2.5.c by Steve001 142 5385 QuakeR 2.3 by lanmy 142 5385 QuakeR 2.3.1, QuakeR 2.3Long by mkurcinski 142 5385 QuakeR 2.3high, QuakeR 2.3min by purpletatoe 142 5385 testQuakeR 2.3, testQuakeR 2.3 by FoldPrefect 142 5385 QuakeR 2.3.1 by Kit Cosby 142 5385 QuakeR 2.3.1 f by prot-bustr 142 5385 QuakeR 2.2_1000, QuakeR 2.3.1_1000, QuakeR 2.3.1_1000, QuakeR 2.3.1_1000, QuakeR 2.3.1_1000, QuakeR 2.3.1_1000, QuakeR 2.4_10000, QuakeR 2.4_10000, QuakeR 2.3.1_pull, QuakeR 2.3.1_mod by FoxyLady 142 5385 FC QuakeR 2.4, FC QuakeR 2.4, _FC QuakeR 2.5 by fishercat 91 213 QuakeR 2.4 mod, QuakeR 2.5 5000, QuakeR 2.4 5000, QuakeR 2.4 5000, QuakeR 2.4 exp5r, QuakeR 2.4 EXP NEW by rsosborne 142 5385 QuakeR 2.4 - forever by scottyler89 142 5385 QuakeR 2.4 by DC1600 142 5385 QuakeR 2.4 long by bareego 142 5385 QuakeR 2.4 1000 0.5%, QuakeR 2.4 1000, QuakeR 2.4 1000 0.25%, QuakeR 2.5 1000 0.5%, QuakeR 2.5 1000, QuakeR 2.5 1000, QuakeR 2.5 1000 0.25%, QuakeR 2.5 1000 0.1%, QuakeR 2.5 1000 0.1%, QuakeR 2.5 10000, QuakeR 2.2 10000 2 by Ignacio 142 85 QuakeR 2.4 semi-infinite by Fjoelsvider 142 5385 QuakeR 2.4x, QuakeR 2.4x, QuakeR 2.4a1, QuakeR 2.51 a, QuakeR 2.51 a by johnmitch 142 16 QuakeR 2.5 by Darkknight900 142 5385 QuakeR 2.4X 5000 by Popijon 142 5385 QuakeR 2.5 infi mut, QuakeR 2.5 inf by oberburgermeister 142 5385 QuakeR 2.4 am by Miedzix 142 5385 kim QuakeR 2.5, Kim QuakeR 2.5, kim QuakeR 2.51, kim QuakeR 2.51, kim QuakeR 2.51 by krulon 142 121 QuakeR 2.3 x, QuakeR 2.51p by SKSbell 142 179 QuakeR 2.51, QuakeR 2.52, QuakeR 2.51 by phi16 8 24 QuakeR 2.5 1000, QuakeR 2.5 OO by Dj-P 142 624 QuakeR 2.51 - S by sotk 142 5385 QuakeR v3.0 by Rav3n_pl 142 853 QuakeR 2.51.1, QuakeR 2.51.wld333, QuakeR 2.51.2, QuakeR 2.51.5, QuakeR 2.51 lite for 425, QuakeR 2.51 5000, QuakeR 2.51 thresh 5, QuakeR 2.51, QuakeR 2.51 thresh 5, QuakeR 2.51 thresh 1 by wld333 142 5385 QuakeR Exploration puzzle by QuakeR 2.4 by BitSpawn 142 5385 QuakeR 2.4 A by SabineA 142 5385 QuakeR 2.51 test by glaciall 142 5385 QuakeR 2.3.1-expl by foldithl1 142 769 QuakeR 2.51a by colsmeghead 142 5385 QuakeR 2.51my, QuakeR 2.51s by kot 142 5385 QuakeR 2.51, QuakeR 2.51 999 by a bunny 142 5385 QuakeR 2.51 fuze by cynthb 142 5385 QuakeR 2.51 - Inc by Incongruous 142 5385 QuakeR 2.51 by FlapjackFury 142 5385 QuakeR 2.51 (modified), QuakeR 2.51 maxBS=0.7, QuakeR 2.51 (modified) by doug.ehlert 142 5385 my quaker by brow42 142 5385 QuakeR 2.51 - 2 by tarriel 142 5385 QuakeR 2.51 pull hard by pfirth 142 259 QuakeR 2.51 - 2 by Gold128 142 5385 QuakeR 2.51! by Azolo 142 5385 QuakeR 2.51 edmod by Phillip J Fold 142 5385 QuakeR 2.51x by ourtown 142 5385 QuakeR 2.51 -myopts by Unleashd 142 5385 QuakeR 2.51 - edit by tokens 142 5385 QuakeR 2.51 by malthreSC 142 163 QuakeR 2.51, QuakeR 2.51 - 10 by Close At Hand 142 5385 QuakeR 2.51 - 500 by Lemon Friend 142 5385 QuakeR 2.51 - 200 Loops by JackWeaver 142 5385 03 - QuakeR 2.51, 03 - QuakeR 2.51 by kitek314_pl 142 271 QuakeR 2.51.1 by Unseen98 142 5385 QuakeR 2.51 - harder, QuakeR 2.51 - more fuze, QuakeR 2.51 0.75, QuakeR 2.51 More by Mark A 142 5385 QuakeR 2.52 by OmniDude 142 5385 QuakeR 2.51 - edit by m9710797 142 5385 QuakeR 2.51 50mill by petr2 142 5385 gw - QuakeR 2.51 by gitwut 142 5385 QuakeR 2.51 500 by Bjro 142 5385 QuakeR 2.51 (short) by Hiro Protagonist 142 468 QuakeR 2.51.2 by fenncruz 142 5385 Quake pmd by pmdpmd 142 5385 QuakeR 2.51 500 tries by goldfish80 142 554 QuakeR 2.51, moe by ivalnic 142 5385


	Authors Rav3n_pl 142 853

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons