Back to Recipes Homepage
recipe picture
Recipe: nspc - Rotamer check
Created by nspc 32 37
5
Your rating: None Average: 5 (4 votes)

Profile

Name: nspc - Rotamer check
ID: 106448
Created on: Sun, 04/03/2022 - 08:39
Updated on: Sun, 04/03/2022 - 17:05
Description:

Set best rotamers subscore in selected sidechains, ignoring other subscore like clash.



Best For


Comments

nspc's picture
User offline. Last seen 18 hours 12 min ago. Offline
Joined: 03/26/2020
Groups: Go Science
rotamer

This recipe is a tool to set all selected rotamers in the best "ideality" position, ignoring other subscores.
It is only to check rotamers, it is not a tool that realy improve them automatically in the puzzle.

In binder puzzles, If thistool result have too mush clashes, and can't be resolve with wiggle, maybe those sidechains can cause problem in lab.
So maybe we have to choose a different sidechain in some situation.

It is a tool that cans help during Hand Folding

Want to try?
Add to Cookbook!
To download recipes to your cookbook, you need to have the game client running.
Parent

none

Children

none

Authors
Sitemap

Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, Boehringer Ingelheim, RosettaCommons