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Recipe: print protein 2.5
Created by LociOiling 3 1
Your rating: None Average: 4.8 (6 votes)


Name: print protein 2.5
ID: 102360
Created on: Fri, 05/19/2017 - 14:29
Updated on: Fri, 05/19/2017 - 21:29

Updated version of "print protein lua2 V0" by marie_s. Version 2.1 includes rulers. Version 2.2 fixes a bug and adds average subscore per segment. Version 2.3 adds density analysis for Electron Density puzzles and makes the main dialog shorter. Version 2.4 works around a textbox bug for cut-and-paste and fixes the subscore selection logic. Version 2.5 fixes rulers and breaks up long lines.

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LociOiling's picture
User offline. Last seen 34 min 9 sec ago. Offline
Joined: 12/27/2012
more fun with rulers

Version 2.5 restores the hundreds marks to the rulers, which is handy for super-sized puzzles like 1378b.

For puzzles over 100 residues, version 2.5 also breaks up the primary and secondary structure into multiple lines. Each line has its own ruler, and shows up to 100 residues. The complete long line is also printed without a ruler. The "sequence if hydrophobic" and "density deviation" sections also get this treatment.

The copy-and-paste sections are not affected by this change, so you still get the complete primary structure string to copy, for example.

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, Boehringer Ingelheim, RosettaCommons