puzzle picture
933: CASP11 Target Ts802: Sparse Data Contacts
Status: Closed

Summary

Name: 933: CASP11 Target Ts802: Sparse Data Contacts
Status: Closed
Created: 07/05/2014
Points: 0
Expired: 07/12/2014 - 10:00
Difficulty: Intermediate
Description: NOTE: This puzzle was closed prematurely and has been reposted here.

For this target, the CASP11 organizers have provided "sparse" experimental data about possible contacts in the protein. Contacts are scored with the Contact Map filter in this puzzle, and there is an upper limit of 15900 possible points from the filter. The starting structure is an extended chain, and secondary structure predictions can be found below in the puzzle comments.
Categories:

Top Groups

RankGroupScorePoints
1Anthropic Dreams23,4260
2Void Crushers22,3440
3Beta Folders21,7380
4SETI.Germany21,6480
5Go Science21,1420

Top Evolvers

Top Soloists



Need this puzzle? Log in to download.  

Comments

bkoep's picture
User offline. Last seen 1 hour 18 min ago. Offline
Joined: 11/15/2012
Groups: None
Secondary structure predictions

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Joined: 10/30/2012
Groups: Beta Folders
something might be wrong,

something might be wrong, have +6900 points from filters

LociOiling's picture
User offline. Last seen 16 min 1 sec ago. Offline
Joined: 12/27/2012
Groups: Beta Folders
contacts all have a a weight of 3?

Sparse but massive?

KarenCH's picture
User offline. Last seen 49 weeks 2 days ago. Offline
Joined: 07/14/2012
(U) max possible is actually

(U) max possible is actually 15300, not 5300. 50 points per contact.

bkoep's picture
User offline. Last seen 1 hour 18 min ago. Offline
Joined: 11/15/2012
Groups: None
Yes

Sorry about that. There was an error in the original puzzle description—the maximum number of points from contacts is 15900. You should receive 150 points for each satisfied contact.

wisky's picture
User offline. Last seen 13 weeks 5 days ago. Offline
Joined: 07/13/2011
A little too much

Perhaps some more fine tuning is needed :P

This change seems to give a little TOO much weight to the contacts, at a loss of good quality folds :) You'll see it when you get the results back!

Get Started: Download
  Windows    OSX    Linux  
Windows
(7/8/10)
OSX
(10.7 or later)
Linux
(64-bit)

Are you new to Foldit? Click here.

Are you a student? Click here.

Are you an educator? Click here.
Search
Only search fold.it
Recommend Foldit
User login
Soloists
Evolvers
Groups
Topics
Top New Users
Sitemap

Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons