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911b: CASP11 T0795: WeFold Round
Status: Closed

Summary

Name: 911b: CASP11 T0795: WeFold Round
Status: Closed
Created: 06/08/2014
Points: 100
Expired: 06/14/2014 - 18:00
Difficulty: Intermediate
Description: NOTE: This puzzle replaces Puzzle 911, which included 2 additional starting models that our WeFold collaborators no longer trust. For this 141 residue CASP11 Target, T0795, we are starting you off with 5 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.
Categories: CASP11, Overall, Prediction

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1Anthropic Dreams9,768100
2Beta Folders9,74983
3Void Crushers9,74069
4Go Science9,70656
5L'Alliance Francophone9,68445

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Comments

beta_helix's picture
User offline. Last seen 16 hours 57 min ago. Offline
Joined: 05/09/2008
Groups: None
Secondary structure predictions:

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the server models that have been provided in the puzzle.
________________

If you are a new Foldit player, please make sure you have completed all these tutorials before trying this puzzle:
- lonely sheets,
- lock and lower,
- rebuild,
- structure and rebuild,
- control over clashing.

beta_helix's picture
User offline. Last seen 16 hours 57 min ago. Offline
Joined: 05/09/2008
Groups: None
Difference between 911 and 911b

Model 4 and Model 5 from Puzzle 911 have not been included in this puzzle, so that you don't waste time on those topologies as our WeFold collaborators are not confident in them!

NOTE: If you did not manually save a solution in Puzzle 911, you can go back to 911, manually save it, and the solution should appear in your manual saves for this puzzle.

Joined: 09/24/2012
Groups: Go Science
how?

Hello,
I don't find 911 in the list of expired puzzles

beta_helix's picture
User offline. Last seen 16 hours 57 min ago. Offline
Joined: 05/09/2008
Groups: None
Anyone else run into this issue?

as you can see, by searching for 911 it shows up for me when I click "Show Expired Puzzles"

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons