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905: CASP11 Refinement Target: TR782
Status: Closed

Summary

Name: 905: CASP11 Refinement Target: TR782
Status: Closed
Created: 05/27/2014
Points: 100
Expired: 06/07/2014 - 16:00
Difficulty: Intermediate
Description: This CASP refinement target has 110 residues. We've been told that ~65% of this starting structure is correct. High Wiggle Power has been enabled for this puzzle. Secondary structure predictions are in the puzzle comments.
Categories: CASP11, Overall, Prediction

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Comments

beta_helix's picture
User offline. Last seen 1 day 9 hours ago. Offline
Joined: 05/09/2008
Groups: None
Secondary structure predictions:

Here is the sequence logo predicted by the SAM server (NOTE that the numbering is off, because the organizers trimmed off the first 25 residues for this refinement target, so ignore those helical predictions at the start!):

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the model that has been provided in the puzzle.
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