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895: CASP11 T0765: WeFold Round
Status: Closed

Summary

Name: 895: CASP11 T0765: WeFold Round
Status: Closed
Created: 05/16/2014
Points: 100
Expired: 05/24/2014 - 03:00
Difficulty: Intermediate
Description: For the 128 residue CASP11 Target T0765, we are giving you 5 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.
Categories: CASP11, Overall, Prediction

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Comments

bkoep's picture
User offline. Last seen 17 hours 11 min ago. Offline
Joined: 11/15/2012
Groups: None
Secondary structure predictions

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the server models that have been provided in the puzzle.

________________

If you are a new Foldit player, please make sure you have completed all these tutorials before trying this puzzle:
- lonely sheets,
- lock and lower,
- rebuild,
- structure and rebuild,
- control over clashing.

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
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