bkoep's picture
User offline. Last seen 20 hours 2 min ago. Offline
Joined: 11/15/2012
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Here are the secondary structure predictions!

Here is the sequence logo predicted by the SAM server (ignore the last six Histidine residues, which are not present in this puzzle):

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the server model that has been provided in the puzzle.

If you are a new Foldit player, please make sure you have completed all these tutorials before trying this puzzle:
- lonely sheets,
- lock and lower,
- rebuild,
- structure and rebuild,
- control over clashing.

Joined: 09/19/2011
Groups: Beta Folders
Did admin shorter the days to play this?

My first client shows 6 days, 20 hours expiring 5/16/14. My second client shows 4 days, 20 hours with an expiration date of 5/14/14 matching the puzzle page.

beta_helix's picture
User offline. Last seen 4 days 12 hours ago. Offline
Joined: 05/09/2008
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Puzzle shortened

Yes, this puzzle was shortened since all 5 RosettaServer models are very similar to one another... and the CASP11 puzzles are going to start piling up soon! :-)

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons