puzzle picture
889: CASP11 Target T0769: Server Model
Status: Closed

Summary

Name: 889: CASP11 Target T0769: Server Model
Status: Closed
Created: 05/09/2014
Points: 100
Expired: 05/14/2014 - 23:00
Difficulty: Intermediate
Description: This CASP11 target has 106 residues, and the Robetta server has converged on a single structure. We've provided the Robetta prediction as the starting model, but feel free to explore other structures! See the puzzle comments for secondary structure predictions.
Categories: CASP11, Overall, Prediction

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2Beta Folders9,98481
3Go Science9,98264
4Void Crushers9,95050
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Comments

bkoep's picture
User offline. Last seen 37 min 17 sec ago. Offline
Joined: 11/15/2012
Groups: None
Here are the secondary structure predictions!

Here is the sequence logo predicted by the SAM server (ignore the last six Histidine residues, which are not present in this puzzle):

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the server model that has been provided in the puzzle.
________________

If you are a new Foldit player, please make sure you have completed all these tutorials before trying this puzzle:
- lonely sheets,
- lock and lower,
- rebuild,
- structure and rebuild,
- control over clashing.

Joined: 09/19/2011
Groups: Beta Folders
Did admin shorter the days to play this?

My first client shows 6 days, 20 hours expiring 5/16/14. My second client shows 4 days, 20 hours with an expiration date of 5/14/14 matching the puzzle page.

beta_helix's picture
User offline. Last seen 3 hours 40 min ago. Offline
Joined: 05/09/2008
Groups: None
Puzzle shortened

Yes, this puzzle was shortened since all 5 RosettaServer models are very similar to one another... and the CASP11 puzzles are going to start piling up soon! :-)

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons