puzzle picture
802: Revisiting Puzzle 686: Black Belt De-novo
Status: Closed

Soloists

RankPlayerGroupScorePoints
251TeKilla 81 1768 Go Science7,0751
252Chris857 81 1768  7,0751
253Anirudhmehra 81 1768  7,0751
254catsick 81 1768  7,0751
255Godfire 81 1768  7,0751
256Osellain 81 1768  7,0751
257rexodarap 81 1768  7,0751


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bkoep's picture
User offline. Last seen 2 hours 28 min ago. Offline
Joined: 11/15/2012
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Here are the secondary structure predictions!

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Valines at residues 25 & 58 are highly predicted to be part of a sheet. However, the Alanines at residues 40 & 47 are predicted to be in a helix!

The above predictions are already on the starting model (based on the horizontal lines in the above figure).

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
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