The two different Exploration multiples are for the two different parts? Just making sure I understand what is there.
The starting model of the binding protein is a dimer of two nearly-identical chains. There is an RMSD filter for each chain of the binding protein.
I apologize that we could not label each filter for its corresponding chain.
Seems the only way to get a decent score on this puzzle is to place arginines all across the outside of the helices. Something just seems off about it.
Thanks for commenting about this. There was a problem with the score function in this puzzle, so it has been closed and reposted as Puzzle 801b.
The reposted puzzle can be found here: