puzzle picture
686: De-novo Freestyle 21
Status: Closed

Soloists

RankPlayerGroupScorePoints
176noops1 87 2553  9,0863
177jtollenaar 87 2553  9,0853
178nemo7731 87 2553  9,0823
179jogie62 87 2553  9,0643
180anne romaine 87 2553  9,0613
181Bithalbierer 87 2553 Team Schleswig-Holstein9,0613
182anna_k1729 87 2553  9,0563
183Schnecke 87 2553  9,0313
184BigMusel 87 2553  9,0262
185krakkdawgg 87 2553  9,0182
186Crossed Sticks 87 1243  9,0092
187kdieber 87 2553  9,0022
188ask80 87 2553  8,9892
189syoifczeri 87 2553  8,9852
190yitzy 87 2553  8,9772
191Arne Heessels 87 351  8,9732
192Mox1 87 2553  8,9712
193aendgraend 87 842 SETI.Germany8,9582
194atimeswift 87 2553  8,9532
195regman7 87 2553  8,9522
196GRandall64 87 2553  8,9462
197AleXusher 87 2553  8,9302
198wisky 87 2553 8,9272
199ds_36 87 2553  8,9242
200rinze 87 70  8,9172


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Comments

beta_helix's picture
User offline. Last seen 28 min 2 sec ago. Offline
Joined: 05/09/2008
Groups: None
Here are the secondary structure predictions!

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Valines at residues 25 & 58 are highly predicted to be part of a sheet. However, the Alanines at residues 40 & 47 are predicted to be in a helix!

The above predictions are already on the starting model (based on the horizontal lines in the above figure).

marie_s's picture
User offline. Last seen 47 weeks 2 days ago. Offline
Joined: 05/18/2008
Groups: None
this puzzle is not difficult

It is easiest that many new ones with layers.
Please put this type of puzzle in intermediate, I think new ones may have fun plying with them.

For new ones, just check you have do all these tutorials:
- lonely sheets,
- lock and lower,
- rebuild,
- structure and rebuild,
- control over clashing.

beta_helix's picture
User offline. Last seen 28 min 2 sec ago. Offline
Joined: 05/09/2008
Groups: None
Thanks marie_s

I have switched it to "Intermediate" and we'll make the Design puzzles with Filters "Advanced" from now on (until we are able to make them easier!)

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
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