679 SSP

Case number:699969-994549
Topic:General
Opened by:frood66
Status:Closed
Type:Bug
Opened on:Tuesday, February 19, 2013 - 08:37
Last modified:Tuesday, February 19, 2013 - 23:47

There are anomalies between the starting solution and the SS prediction. Solution is missing 7 segs and the SS is incorrectly applied

(Tue, 02/19/2013 - 08:37  |  2 comments)


beta_helix's picture
User offline. Last seen 3 days 4 hours ago. Offline
Joined: 05/09/2008
Groups: None
Status: Open » Open

Thank you for catching this mistake!
The trimming was based on this disordered prediction:
http://prdos.hgc.jp/cgi-bin/meta/result.cgi?ppid=146514p1d1361214996
but indeed I forgot to apply that to the SSP!

I will re-run the trimmed sequence through SAM-T08 and repost the puzzle with the correct SS applied to the starting model.
You will be able to load in any manually saved solutions.

Sorry for this mistake and thanks again for catching it early!

beta_helix's picture
User offline. Last seen 3 days 4 hours ago. Offline
Joined: 05/09/2008
Groups: None
Status: Open » Closed

The fixed puzzle (with correct secondary structure predictions) has been reposted:
http://fold.it/portal/node/994551

Sitemap

Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons