puzzle picture
671: De-novo Freestyle 19
Status: Closed

Soloists

RankPlayerGroupScorePoints
226sbea3 75 1437  8,5071
227Tommyjh100 75 1437  8,4931
228ResearchKidd 75 1437  8,4771
229ch00215 75 1437  8,4711
230Swiper 75 1437  8,4291
231Lindata 39 1437 Anthropic Dreams8,3811
232Muni2Muni 75 1437  8,3501
233Lutianyu 75 1437  8,3081
234greenmachine 75 1437  8,2981
235hpaege 75 1437  8,2531
236dflear 75 1437 Anthropic Dreams8,2441
237carbon5678 75 1437  8,2231
238Cyberkashi 13 84  8,2191
239crawlee34225 75 1437  8,2171
240Andrew.Dexter 75 1437 Storm8,2081
241LostLogia4 75 1437  8,1831
242jinguluninja 75 1437  8,1721
243NAHA3 75 1437  8,1371
244multaq 75 1040 L'Alliance Francophone8,1361
245Hubsi 75 1437  8,1281
246mines 75 1437  8,1181
247niai 75 1437  8,1061
248richard c 75 1437  8,1001
249cassandraberry81897 75 1437 Beta Folders8,0881
2503.14origami 75 1437  8,0471


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beta_helix's picture
User offline. Last seen 16 hours 4 sec ago. Offline
Joined: 05/09/2008
Groups: None
Here are the secondary structure predictions

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Valines at residues 52 & 55 are highly predicted to be part of a helix. However, the Alanines at residues 35, 68 & 71 are not predicted to be anything!

The above predictions are already on the starting model (based on the horizontal lines in the above figure).

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, Boehringer Ingelheim, RosettaCommons