puzzle picture
671: De-novo Freestyle 19
Status: Closed

Soloists

RankPlayerGroupScorePoints
176georg137 18 35  9,1232
177martinf 46 1458  9,1112
178CraniumAmbiguity 46 1458  9,0952
179decbin 46 1458  9,0882
180Heinermann 46 1458 Anthropic Dreams9,0881
181otong1 46 1458 L'Alliance Francophone9,0871
182WBarme1234 46 20  9,0831
183xaszatm 46 1458  9,0811
184frostschutz 46 93  9,0661
185boondog 46 1458  9,0621
186deLaCeiba 46 1458  9,0471
187Savas 46 477 Eὕρηκα! Heureka!9,0341
188rinze 46 51  9,0331
189Cyzaki 46 1458 Foldit UK9,0261
190lordha 46 1458  9,0171
191Altercomp 46 327  9,0151
192packer 46 1458 Go Science9,0111
193philcalhoun 46 1458  9,0071
194kdieber 46 1458  8,9891
195kmf1016 46 1458  8,9861
196MalcolmW 46 1458  8,9731
197parsnip 46 1458  8,9671
198NR22 46 1458  8,9621
199ferr606 46 1458  8,9301
200twisted1 46 1458  8,8651


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beta_helix's picture
User offline. Last seen 6 days 9 hours ago. Offline
Joined: 05/09/2008
Groups: None
Here are the secondary structure predictions

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Valines at residues 52 & 55 are highly predicted to be part of a helix. However, the Alanines at residues 35, 68 & 71 are not predicted to be anything!

The above predictions are already on the starting model (based on the horizontal lines in the above figure).

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
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