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660: Return of the Multi-Start Pseudomonas Aeruginosa
Status: Closed

Summary

Name: 660: Return of the Multi-Start Pseudomonas Aeruginosa
Status: Closed
Created: 12/09/2012
Points: 100
Expired: 12/19/2012 - 23:00
Difficulty: Intermediate
Description: We are giving you 5 server models for this currently unsolved protein. Each time you reset the puzzle one of these 5 Zhang server predictions will randomly be chosen. They are also in the Alignment Tool so you can use partial threading and well as an extended chain. We would like to see how well you can refine these models that were not generated using Rosetta. More info about this protein in the puzzle comments.
Categories: Overall, Prediction

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Comments

Sun, 12/09/2012 - 21:18
#1
tamirh 71 1514
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User offline. Last seen 8 years 14 weeks ago. Offline
Joined: 05/11/2012
Groups: null pointer exception
More info here:

This is a repost of Puzzle 459: Multi-Start Pseudomonas aeruginosa . More background on this puzzle can be found in the original puzzle comments: http://fold.it/portal/node/990342

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Sun, 12/09/2012 - 22:06
#2
auntdeen 71 1514
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Joined: 04/19/2009
Groups: Anthropic Dreams
Shouldn't this be puzzle number 660

Instead of 670?

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Mon, 12/10/2012 - 18:23
#3
tamirh 71 1514
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User offline. Last seen 8 years 14 weeks ago. Offline
Joined: 05/11/2012
Groups: null pointer exception
My mistake

I've corrected the puzzle numbers

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Mon, 12/10/2012 - 06:31
#4
Susume 71 558
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User offline. Last seen 3 hours 13 min ago. Offline
Joined: 10/02/2011
Groups: Anthropic Dreams
Secondary structure?

Could you please re-post the SAM prediction of secondary structure (or one from jpred)? It no longer appears on the original puzzle page.

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Mon, 12/10/2012 - 09:51
#5
spdenne 37 38
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Joined: 10/01/2011
Groups: Void Crushers
Is it this one?

Is it this one? http://fold.it/portal/node/990184

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Mon, 12/10/2012 - 18:29
#6
tamirh 71 1514
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User offline. Last seen 8 years 14 weeks ago. Offline
Joined: 05/11/2012
Groups: null pointer exception
Yes

Thank you, the thumbnail seems to have disappeared and so the link became invisible.

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Tue, 12/11/2012 - 02:31
#7
gramps 71 1514
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User offline. Last seen 7 years 16 weeks ago. Offline
Joined: 12/16/2010
Groups: Anthropic Dreams
new public Recipe: 670 comment structs

http://fold.it/portal/recipe/44916

Thanks spdenne for finding the prediction page :-)

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, Boehringer Ingelheim, RosettaCommons