puzzle picture
600: CASP10 Target T0743
Status: Closed

Soloists

RankPlayerGroupScorePoints
151FScot 70 1873  9,1811
152giobrach 70 1873  9,1041
153nullenigma 70 1873  9,0801
154sbea3 70 1873  9,0381
155phallicies 70 1873  8,9831
156Mozz97 70 1873  8,7341
157CoachB 70 1873  8,6931
158Ditti123 70 1873 7Monkeys8,6861
159miss wanr 70 1873 foldeRNA8,6691
160smileyfuntime 70 1873  8,6301
161spirogyra 70 1873  8,6051
162lboninsouza 70 1873  8,5931
163KingLear 70 1873  8,5341
164AIDA64 70 1873  8,5091
165RandyFithian 70 1873  8,4701
166deLaCeiba 70 1873  8,4671
167ch00215 70 1873  8,4321
168Lumir 70 1873 Czech National Team8,3631
169ForTex 70 1873  8,2291
170crawlee34225 70 1873  8,1721
171weurhartdezirez 70 1873 Freedom Folders8,1541
172BoboMcBob 70 1873  8,1471
173JameAlec 70 1873  8,1411
174richard c 70 1873  8,1241
175armadillo314 70 1873  8,1231


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beta_helix's picture
User offline. Last seen 22 min 2 sec ago. Offline
Joined: 05/09/2008
Groups: None
Additional info about this CASP target

Here is the CASP link for this target (showing the amino acid sequence):
http://predictioncenter.org/casp10/target.cgi?id=168
____________________________________________________

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Leucines at residues 22, 28, 78, 91 & 94 are highly predicted to be in a helix. However, the Leucines at residues 109 & 144 are predicted to be in a sheet.
____________________________________________________

Link to template PDBs:

http://www.pdb.org/pdb/explore/explore.do?structureId=3fh1
http://www.pdb.org/pdb/explore/explore.do?structureId=2cw9
http://www.pdb.org/pdb/explore/explore.do?structureId=3k7c

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