puzzle picture
592: CASP10 Target T0730
Status: Closed

Soloists

RankPlayerGroupScorePoints
176robinche 70 1873  7,8101
177alwin 70 1873  7,6751
178Tibal 70 1873  7,6571
179m.gr.b 70 1873  7,6251
180redguy 70 1873  7,5921
181omarhedaya 70 1873  7,5631
182putnik 70 1873 Russian team7,5371
183shamrockveg 70 1873  7,5271
184canada 70 1873  7,5151
185rburmester 70 1873  7,5111
186lahilahi 70 1873  7,5041
187BrockHutson 70 1873  7,5041
188crawlee34225 70 1873  7,5041
189Artiem 70 1873  7,5041
190syneyenys 70 1873  7,5041
191Bearpaw 70 1873 Team Canada7,5041
192HIX_Plus 70 1873  7,5041
193wolverine_16 70 1873  7,5041
194tavelsudd 70 1873  7,5031
195iakchos 70 1873  7,5031
196connectonaut 70 1873  7,5031
197smilegirl24 70 1873  7,5031
198T_Bones 70 1873  7,5031
199ales6164 70 1873  7,5031
200z1w1j 70 1873  7,5031


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beta_helix's picture
User offline. Last seen 1 day 5 hours ago. Offline
Joined: 05/09/2008
Groups: None
Additional info about this CASP target

Here is the CASP link for this target (showing the amino acid sequence):
http://predictioncenter.org/casp10/target.cgi?id=150
____________________________________________________

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Leucines at residues 7, 13 & 18 are highly predicted to be in a helix. However, the Leucines at residues 46, 129, 134 & 149 are predicted to be in a sheet.
____________________________________________________

Link to template PDBs:

http://www.pdb.org/pdb/explore/explore.do?structureId=1nep
http://www.pdb.org/pdb/explore/explore.do?structureId=3pdd
http://www.pdb.org/pdb/explore/explore.do?structureId=3qc5
http://www.pdb.org/pdb/explore/explore.do?structureId=2l3b

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