Refinement puzzles in the prediction category?

Case number:699969-993095
Topic:General
Opened by:spmm
Status:Closed
Type:Question
Opened on:Wednesday, July 4, 2012 - 09:31
Last modified:Wednesday, July 4, 2012 - 21:20

It is not clear to me why the refinement puzzles are being included in the 'Prediction' leaderboard? In fact four of the five puzzles at the top of the list are refinement puzzles. Hence the only difference to the Overall is the inclusion of the Flu puzzle and it is identical to the CASP list.

Prediction Category
Puzzle Expired
583: Large CASP10 Refinement Puzzle: TR689 19:23
582: Beginner CASP10 Refinement Puzzle: TR674 06/30
581: CASP10 Target T0711 06/26
579: Beginner CASP10 Refinement Puzzle: TR662 06/24
577: CASP10 Refinement Puzzle: TR688 06/23

Overall
Puzzle Expired
583: Large CASP10 Refinement Puzzle: TR689 19:24
582: Beginner CASP10 Refinement Puzzle: TR674 06/30
581: CASP10 Target T0711 06/26
578: Beginner Flu Puzzle 4 06/25
579: Beginner CASP10 Refinement Puzzle: TR662 06/24

CASP
Puzzle Expired
583: Large CASP10 Refinement Puzzle: TR689 19:25
582: Beginner CASP10 Refinement Puzzle: TR674 06/30
581: CASP10 Target T0711 06/26
579: Beginner CASP10 Refinement Puzzle: TR662 06/24
577: CASP10 Refinement Puzzle: TR688 06/23

(Wed, 07/04/2012 - 09:31  |  1 comment)


jflat06's picture
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Joined: 09/29/2010
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Status: Open » Closed

Refinement is still doing protein structure prediction - it's just that we know more about the structure than we normally do. There's still missing information, and we're still trying to predict the native of a particular protein. As CASP is all prediction (and a good chunk of the total overall puzzles), you'll notice a lot of overlap between these during CASP.

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