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590: CASP10 Target T0728

Status: Closed

Soloists

Rank	Player	Group	Score	Points
51	infjamc 33 22	Contenders	10,860	18
52	Heinermann 46 1458	Anthropic Dreams	10,857	17
53	gitwut 46 1458	Contenders	10,856	17
54	spdenne 46 338	Void Crushers	10,835	16
55	cobaltteal 46 1458		10,817	16
56	SKSbell 46 1458		10,772	15
57	cbwest 46 632	foldeRNA	10,755	14
58	ivalnic 46 863		10,733	14
59	yoyo washington 46 1458	L'Alliance Francophone	10,732	13
60	goastano 46 1458	L'Alliance Francophone	10,718	13
61	Mr_Jolty 46 1458	Natural Abilities	10,683	12
62	nemo7731 46 1458		10,656	12
63	harp 46 1458	Anthropic Dreams	10,650	11
64	tallguy-13088 46 1458		10,648	11
65	jobo0502 46 21	L'Alliance Francophone	10,644	11
66	Jean-Bob 46 1458	L'Alliance Francophone	10,635	10
67	Museka 46 1458	L'Alliance Francophone	10,627	10
68	heather-1 46 87		10,616	9
69	Grom 46 327	Russian team	10,607	8
70	Flagg65a 46 1458		10,605	8
71	BitSpawn 46 1458	Anthropic Dreams	10,598	8
72	bamh 46 47		10,584	7
73	weitzen 46 1458		10,571	7
74	keithv 46 1458	Anthropic Dreams	10,547	7
75	Tyggy Too 46 1458	Anthropic Dreams	10,534	7

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Comments

Tue, 07/03/2012 - 22:59

#101

Foldit Staff

beta_helix 46 863

beta_helix's picture

Offline

Joined: 05/09/2008

Groups: None

Additional info about this CASP target

Here is the CASP link for this target (showing the amino acid sequence):
http://predictioncenter.org/casp10/target.cgi?id=148
____________________________________________________

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Leucines at residues 8, & 17 are highly predicted to be in a helix. However, the Leucine at residue 60 is predicted to be in a sheet.
____________________________________________________

Link to template PDBs:

http://www.pdb.org/pdb/explore/explore.do?structureId=3d33
http://www.pdb.org/pdb/explore/explore.do?structureId=2eig
http://www.pdb.org/pdb/explore/explore.do?structureId=3jqw
http://www.pdb.org/pdb/explore/explore.do?structureId=2l3b


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