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590: CASP10 Target T0728
Status: Closed

Groups

RankGroupScorePoints
1Contenders11,645100
2Beta Folders11,61176
3Anthropic Dreams11,60156
4Go Science11,37941
5L'Alliance Francophone11,36530
6foldeRNA11,22721
7Russian team11,20215
8Void Crushers11,18111
9Team Hungary10,9687
10Gargleblasters10,9615
11FoldIt@Netherlands10,9163
12Natural Abilities10,6832
13Richard Dawkins Foundation10,6162
14SETI.Germany10,3041
15Mojo Risin'10,3001
16Atlanta10,2981
17Androids10,2281
18Another Hour Another Point9,9661
197Monkeys9,8681
20E?????! Heureka!9,0411
21Skeptics Guide to the Universe8,7731
22Czech National Team8,7041
23Geekdo7,5701
24Team Canada7,5171
25Extraterrestrials4,9221


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beta_helix's picture
User offline. Last seen 16 hours 33 min ago. Offline
Joined: 05/09/2008
Groups: None
Additional info about this CASP target

Here is the CASP link for this target (showing the amino acid sequence):
http://predictioncenter.org/casp10/target.cgi?id=148
____________________________________________________

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Leucines at residues 8, & 17 are highly predicted to be in a helix. However, the Leucine at residue 60 is predicted to be in a sheet.
____________________________________________________

Link to template PDBs:

http://www.pdb.org/pdb/explore/explore.do?structureId=3d33
http://www.pdb.org/pdb/explore/explore.do?structureId=2eig
http://www.pdb.org/pdb/explore/explore.do?structureId=3jqw
http://www.pdb.org/pdb/explore/explore.do?structureId=2l3b

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