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560: Quick CASP10 T0660 Puzzle
Status: Closed
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Evolvers
1 | dembones 46 1603 | Contenders | 10,948 | 100 | 2 | Bletchley Park 8 7 | Contenders | 10,946 | 98 | 3 | mimi 46 210 | Contenders | 10,927 | 95 | 4 | SimplySue 46 1603 | Anthropic Dreams | 10,912 | 93 | 5 | BitSpawn 46 143 | Anthropic Dreams | 10,912 | 91 | 6 | smilingone 46 194 | Go Science | 10,911 | 88 | 7 | pauldunn 46 394 | Go Science | 10,909 | 86 | 8 | mbinfield 46 1603 | Go Science | 10,907 | 84 | 9 | Wildcat777 46 1603 | Void Crushers | 10,897 | 82 | 10 | kabubi 46 949 | Void Crushers | 10,895 | 80 | 11 | packer 46 949 | Go Science | 10,888 | 77 | 12 | B_2 46 1603 | Go Science | 10,888 | 75 | 13 | lamoille 46 1603 | Anthropic Dreams | 10,853 | 73 | 14 | jamiexq 16 35 | Anthropic Dreams | 10,852 | 71 | 15 | sirenbrian2 46 1603 | Anthropic Dreams | 10,846 | 70 | 16 | keithv 46 1603 | Anthropic Dreams | 10,844 | 68 | 17 | alwen 46 554 | Anthropic Dreams | 10,841 | 66 | 18 | Mike Cassidy 46 59 | Void Crushers | 10,836 | 64 | 19 | spmm 46 182 | Void Crushers | 10,821 | 62 | 20 | bertro 46 400 | foldeRNA | 10,774 | 61 | 21 | JasperD 46 554 | foldeRNA | 10,771 | 59 | 22 | krulon 46 1603 | foldeRNA | 10,762 | 57 | 23 | Ch Garnier 46 257 | L'Alliance Francophone | 10,756 | 56 | 24 | BootsMcGraw 10 8 | Contenders | 10,752 | 54 | 25 | phi16 9 30 | Anthropic Dreams | 10,749 | 53 | Need this puzzle? Log in to download.
Comments
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Below is a screenshot of all the Baker-RosettaServer, Quark, and Zhang-Server predictions.
The last 50 residues are shown as lines so that you can see how conserved the rest of the protein is.
The key to this CASP10 target will be figuring out where the last 50 residues go, so good luck!
And here is the link to secondary structure predictions for this target:
http://fold.it/portal/node/992632#comment-17334
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You might be able to tell from the above screenshot that all the servers have tried to form a helix (or 2 helices) with the last 50 residues.
Here is a hint to easily make a helix (if that is what you want to attempt):
The rebuild tool takes structure assignment into account, so you can set the secondary structure to helix and then Rebuild. Foldit will then make a helix out of that region.