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560: Quick CASP10 T0660 Puzzle
Status: Closed
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Groups
| 1 | Contenders | 10,948 | 100 |
| 2 | Anthropic Dreams | 10,912 | 74 |
| 3 | Go Science | 10,911 | 53 |
| 4 | Void Crushers | 10,901 | 38 |
| 5 | L'Alliance Francophone | 10,792 | 27 |
| 6 | foldeRNA | 10,774 | 18 |
| 7 | Another Hour Another Point | 10,720 | 13 |
| 8 | FoldIt@Netherlands | 10,710 | 8 |
| 9 | Team Hungary | 10,688 | 6 |
| 10 | Gargleblasters | 10,653 | 4 |
| 11 | SETI.Germany | 10,647 | 2 |
| 12 | Richard Dawkins Foundation | 10,565 | 2 |
| 13 | Freedom Folders | 10,314 | 1 |
| 14 | Newton's Cradle | 10,219 | 1 |
| 15 | Piratenpartei Deutschland | 10,110 | 1 |
| 16 | Mojo Risin' | 10,082 | 1 |
| 17 | The Knights Who Say Ni! | 9,525 | 1 |
| 18 | Geekdo | 9,384 | 1 |
| 19 | xkcd | 9,381 | 1 |
| 20 | Atlanta | 9,163 | 1 |
| 21 | Structuralists | 9,155 | 1 |
| 22 | Team Commonwealth | 9,042 | 1 |
| 23 | Team Canada | 8,651 | 1 |
| 24 | Russian team | 8,651 | 1 |
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Comments
Below is a screenshot of all the Baker-RosettaServer, Quark, and Zhang-Server predictions.
The last 50 residues are shown as lines so that you can see how conserved the rest of the protein is.
The key to this CASP10 target will be figuring out where the last 50 residues go, so good luck!
And here is the link to secondary structure predictions for this target:
http://fold.it/portal/node/992632#comment-17334
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You might be able to tell from the above screenshot that all the servers have tried to form a helix (or 2 helices) with the last 50 residues.
Here is a hint to easily make a helix (if that is what you want to attempt):
The rebuild tool takes structure assignment into account, so you can set the secondary structure to helix and then Rebuild. Foldit will then make a helix out of that region.