puzzle picture
469: De-novo Freestyle 14
Status: Closed


Name: 469: De-novo Freestyle 14
Status: Closed
Created: 10/17/2011
Points: 100
Expired: 10/25/2011 - 10:00
Difficulty: Advanced
Description: We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.
Categories: Overall, Prediction

Top Groups

26Natural Abilities9,3331
27Wisconsin Pride9,3051
28Team Texas9,2251
29Team Hungary9,1041
30Team Canada9,0831

Top Evolvers

Top Soloists

26RabidNimravid 51 1399  10,12077
27spvincent 30 9 Contenders10,11776
28malthreSC 51 1399  10,11275
29faron4 51 1399 BOINC@Poland10,10974
30tallguy-13088 51 1399  10,10673

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beta_helix's picture
User offline. Last seen 1 week 4 days ago. Offline
Joined: 05/09/2008
Groups: None
Please try to use these secondary structure predictions:

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
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