puzzle picture
Beginner Puzzle: Copper Ion Binding Protein
Status: Closed

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RankGroupScorePoints
1L'Alliance Francophone9,78850
2Go Science9,78345
3Anthropic Dreams9,78240
4Contenders9,78135
5foldeRNA9,77731
6Androids9,76327
7SloveniaFolding9,76124
8Void Crushers9,75821
9Trailer Trash9,71019
10Team Tornado9,70916
11Russian team9,68714
12Natural Abilities9,68412
13xkcd9,65611
14TT-group9,6399
15SETI.Germany9,5908
16Team Hungary9,5887
17Richard Dawkins Foundation9,5866
18E?????! Heureka!9,5395
19Purdue BoilerFolders9,4524
20Freedom Folders9,4304
21Team Toombs9,4233
22Skills to pay the Bills9,3773
23BOINC.Italy9,3732
24Team Texas9,3472
25Mojo Risin'9,3432


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Comments

Joined: 05/09/2008
Groups: None
START HERE:

if you are new to Foldit, here are detailed instructions to get you started:
http://fold.it/portal/node/988864

HINT: If you are having trouble with this puzzle, try using the "Align Guide" tool:

By right clicking on a region of the protein (not the guide) it will pull up a menu with 6 tools. The bottom right one is "Align Guide". Clicking on it will align the native guide to the region of the protein you selected.
This will help you see what sections on your protein correspond to the guide!

Working with the guide is much more user friendly when you use the advanced viewing options.
In the game click on Menu->General Options and select "Show Advanced GUI" and click Done.
Click on View, turn on 'Show Outline,' set the background color to white, and view stubs on the sidechains, view the guide, and set color relative to guide. Turn all the other view options off."

For even more info: http://foldit.wikia.com/wiki/Tlaloc%27s_Strategy#Technique_for_Matching_a_Guide

gramps's picture
User offline. Last seen 7 years 35 weeks ago. Offline
Joined: 12/16/2010
what's the target for banding to the guide?

I've been burying the sphere at the end of a default band completely as possible into the guide shadow completely covering the base of the sidechain shadow you get when you mouse over the sidechain or stub; however, ...

in group chat one of my colleagues recommends lining up with the "collar" at the base of the sphere. Now that they've pointed this out I suspect the collar is actually a cone with point at the center of the sphere (mostly hidden by the sphere usually), and this point indicates the end of the band, but I recall no documentation on this.

So what's the scoop on what the parts of a band mean, and how we should band to a guide?

Joined: 09/29/2011
Groups: None
where's the puzzle?

i just worked a 13hr shift and then went to class and heard about this but cant find the puzzles? f it i'll try later when i'm not so tired.

Joined: 05/09/2008
Groups: None
START HERE:

if you are new to Foldit, here are detailed instructions to get you started:
http://fold.it/portal/node/988864

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, Boehringer Ingelheim, RosettaCommons