puzzle picture
447: De-novo Freestyle 12
Status: Closed


Name: 447: De-novo Freestyle 12
Status: Closed
Created: 08/16/2011
Points: 100
Expired: 08/24/2011 - 13:00
Difficulty: Advanced
Description: We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.
Categories: Overall, Prediction

Top Groups

2Anthropic Dreams10,87075
4Void Crushers10,78840
5Go Science10,72928

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Top Soloists

1wudoo 51 1401 foldeRNA10,969100
2Enzyme 48 40  10,91498
3Mark- 51 1401 Contenders10,85595
4deus911 51 1401 foldeRNA10,82292
5Madde 51 1401 Void Crushers10,78889

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beta_helix's picture
User offline. Last seen 1 week 6 days ago. Offline
Joined: 05/09/2008
Groups: None
Please try to use these secondary structure predictions:

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 83 is highly predicted to be part of a sheet. However, the Leucine at residue 62 has an equal probability of being anything.

rws's picture
User offline. Last seen 2 years 37 weeks ago. Offline
Joined: 08/13/2008
Groups: Go Science
conserved hypothetical

This is a conserved hypothetical from Pseudomonas aeruginosa. No models. No known function. No known domains.



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