puzzle picture
441: De-novo Freestyle 10
Status: Closed

Groups

RankGroupScorePoints
26DSN @ Home7,4561
27Hungary7,4471
28Friday Lab7,4471
29Another Hour Another Point2,1191


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beta_helix's picture
User offline. Last seen 1 day 23 hours ago. Offline
Joined: 05/09/2008
Groups: None
Please try to use these secondary structure predictions:

These secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 59 is highly predicted to be part of a helix. However, the Valine at residue 80 is highly predicted to be in a sheet or loop region (but not a helix).

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons