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431: Multi-Start Nuclear Ribonucleoprotein
Status: Closed


Name: 431: Multi-Start Nuclear Ribonucleoprotein
Status: Closed
Created: 06/15/2011
Points: 100
Expired: 06/21/2011 - 13:00
Difficulty: Intermediate
Description: We are giving you 5 server models for this currently unsolved protein. Each time you reset the puzzle one of these 5 Zhang server predictions will randomly be chosen. They are also in the Alignment Tool so you can use partial threading and well as an extended chain. We would like to see how well you can refine these models that were not generated using Rosetta.
Categories: Overall, Prediction

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gramps's picture
User offline. Last seen 7 years 27 weeks ago. Offline
Joined: 12/16/2010
additional information on partial threading here ...

"Alignment Tool info", by beta_helix, January 26, 2011.

gramps's picture
User offline. Last seen 7 years 27 weeks ago. Offline
Joined: 12/16/2010
reset scores of the five Zhang server predictions

Alignment ---- Reset
Name ---- Score
Zhang1 3764.893
Zhang2 1872.704
Zhang3 3638.274
Zhang4 3133.946
Zhang5 5196.911

If you reset your puzzle you will see one of the five above scores depending on which server prediction you were given.

For more information on the (rather desperate) procedure for discovering these values, see the comments under Puzzle 390: Unsolved monkey virus protein

Joined: 06/17/2010
Zhang4 3133

looks to scoring best just after fuzing :)

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, Boehringer Ingelheim, RosettaCommons