puzzle picture
398: De-novo Freestyle 3
Status: Closed

Summary

Name: 398: De-novo Freestyle 3
Status: Closed
Created: 02/05/2011
Points: 100
Expired: 02/12/2011 - 23:00
Difficulty: Advanced
Description: This currently unsolved protein does not have any templates that we can use, so we are giving it to you as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments.
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Top Groups

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26Boinc.be7,6911
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29DSN @ Home7,5461
30Russian team2,4011

Top Evolvers

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26aendgraend 60 320 SETI.Germany10,95454
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28Flagg65a 60 429  9,48051

Top Soloists

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26spmm 60 2065 Void Crushers11,05654
27poprafka 60 2065 Slovak National Team11,04053
28xor12 60 2065  11,00051
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30katling 60 2065  10,89849


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Comments

beta_helix's picture
User offline. Last seen 17 hours 12 min ago. Offline
Joined: 05/09/2008
Groups: None
Please try to use these secondary structure predictions:

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 26 is highly predicted to be part of a helix. However, the Leucine at residue 34 is predicted to have an equal probability of being anything.

beta_helix's picture
User offline. Last seen 17 hours 12 min ago. Offline
Joined: 05/09/2008
Groups: None
looks like that's the one
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