puzzle picture
398: De-novo Freestyle 3
Status: Closed


Name: 398: De-novo Freestyle 3
Status: Closed
Created: 02/05/2011
Points: 100
Expired: 02/12/2011 - 23:00
Difficulty: Advanced
Description: This currently unsolved protein does not have any templates that we can use, so we are giving it to you as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments.

Top Groups

2Anthropic Dreams11,59579
3Go Science11,48261
4Pauling's Pitbulls11,37347
5L'Alliance Francophone11,33836

Top Evolvers

Top Soloists

1Mark- 113 2760 Contenders11,910100
2aap 113 2760  11,74598
3Enzyme 113 549  11,73596
4BootsMcGraw 33 19 Contenders11,52494
5Ignacio 113 1665 Go Science11,48291

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Joined: 05/09/2008
Groups: None
Please try to use these secondary structure predictions:

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 26 is highly predicted to be part of a helix. However, the Leucine at residue 34 is predicted to have an equal probability of being anything.

Joined: 05/09/2008
Groups: None
looks like that's the one
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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
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