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354: CASP9 Refinement Puzzle 10 - Threaded Start
Status: Closed

Summary

Name: 354: CASP9 Refinement Puzzle 10 - Threaded Start
Status: Closed
Created: 08/12/2010
Points: 100
Expired: 08/18/2010 - 23:59
Difficulty: Intermediate
Description: This is another starting point for our last CASP9 Refinement puzzle (same as puzzle 353). Since this is the one of the most challenging refinement targets, with big deviations from the native structure in the areas around residues 10, 20 and 50 (these regions are denoted in note mode; press 3 to enter Note Mode), we are giving you a starting model that has been threaded to the model given to us by CASP except for these areas that need to be refined. You can use the alignment tool if you want to thread it yourself and 'Accept Thread' at a different point.
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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons