Allow larger behaviour setings to expand protein to find new minima

Case number:845813-987943
Topic:Game: Tools
Opened by:Datstandin
Opened on:Wednesday, June 30, 2010 - 00:22
Last modified:Saturday, July 27, 2013 - 04:18

Behaviour->Class Importance (0 - 2.0)
The idea is to provide a simple way to expand a protein when it is stuck in a local minima. By increasing the clash importance above normal, the protein can be expanded and have an opportunity to settle in a different configuration. Currently, this process is diffucult requiring multiple manual bands with increase length. Using the Behaviour setting would greatly simplify the process.

(Wed, 06/30/2010 - 00:22  |  3 comments)

Joined: 09/18/2009
Groups: SETI.Germany

Is this technical possible?

Joined: 04/11/2010

If clashing importance can be reduced, it should also be able to be increased. Is what happens when you go from 0.5 to 1.0 anyway.

spmm's picture
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Joined: 08/05/2010
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