quicker way to copy secondary structures on freestyle puzzle
|Opened on:||Friday, March 26, 2010 - 07:13|
|Last modified:||Tuesday, August 23, 2011 - 20:16|
Isn't there a way in freestyle puzzles (where you get the secondary structure predictions in the comment of a post) to quickly apply these structures on your protein. What I now do is look at the prediction, e.g. third amino acid is helical, go to puzzle and manually change to helical,...a bit tedious..
Couldn't we use something like the align tool where you then can thread your protein against the secondary structure prediction (instead of a known sequence and 3D structure). Or just be able to see the sequence like in the align tool and be able to click on the sequence and say which secondary structure is must have. Hope this is all clear what I mean. I'm just looking for a way out to manually assigning sec structures on a freestyle puzzle..