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278: Mini-CASP 19 - Freestyle Part Deux
Status: Closed

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beta_helix's picture
User offline. Last seen 2 weeks 4 days ago. Offline
Joined: 05/09/2008
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Secondary structure prediction results:

Please try to use these secondary structure predictions:

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Alanine at residue 7 is highly predicted to be part of a helix. However, the Alanine at residue 11 is predicted to have an equal probability of being anything!

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, Boehringer Ingelheim, RosettaCommons