puzzle picture
231: Mini-CASP 12 - Freestyle
Status: Closed

Summary

Name: 231: Mini-CASP 12 - Freestyle
Status: Closed
Created: 12/08/2009
Points: 100
Expired: 12/13/2009 - 23:00
Difficulty: Advanced
Description: Our 12th Mini-CASP target is another de-novo (or ab-initio) target. This means that there is no solved structure that has a similar sequence that we can start our predictions from. This is exciting because template-free targets are rare so we are lucky to be able to predict this. Since we have no idea where to even start, we are giving you an extended chain to see what you come up with. Until then, good luck freestyle folding! The secondary structure prediction is posted in the puzzle comments.
Categories:

Top Groups

RankGroupScorePoints
1Void Crushers10,510100
2Richard Dawkins Foundation10,48479
3Russian team10,26562
4Another Hour Another Point10,18948
5Contenders10,13837

Top Evolvers

Top Soloists



Need this puzzle? Log in to download.  

Comments

beta_helix's picture
User offline. Last seen 9 hours 18 min ago. Offline
Joined: 05/09/2008
Groups: None
Secondary structure prediction results:

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 53 is highly predicted to be part of a helix. However, the Valine at residue 8 is predicted to have an equal probability of being loop or strand.

Get Started: Download
  Windows    OSX    Linux  
Windows
(7/8/10)
OSX
(10.7 or later)
Linux
(64-bit)

Are you new to Foldit? Click here.

Are you a student? Click here.

Are you an educator? Click here.
Search
Only search fold.it
Recommend Foldit
User login
Soloists
Evolvers
Groups
Topics
Top New Users
Sitemap

Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons