Summary

Name:	212: Mini-CASP 8-Freestyle
Status:	Closed
Created:	10/20/2009
Points:	100
Expired:	10/28/2009 - 23:00
Difficulty:	Advanced
Description:	Here is the next Mini-CASP target whose solved structure will be released soon. Again we are giving you an extended chain to see what you come up with. This might be difficult since this chain has 149 residues, so we will release Rosetta predictions for this target next week. Until then, good luck freestyle folding! The secondary structure prediction will be posted in the puzzle comments.
Categories:

Top Groups

Rank	Group	Score	Points
1	Richard Dawkins Foundation	11,150	100
2	Another Hour Another Point	10,872	74
3	Void Crushers	10,843	53
4	Contenders	10,604	38
5	Crunching Family	10,437	27

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Top Evolvers

Rank	Player	Group	Score	Points
1	drbh 45 1438	Richard Dawkins Foundation	11,088	100
2	setiman 45 1438	Richard Dawkins Foundation	11,087	97
3	maxwell_thethird 45 1438	Richard Dawkins Foundation	11,073	89
4	spvincent 29 11		10,872	86
5	Guyoni 45 1438		10,864	82

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Top Soloists

Rank	Player	Group	Score	Points
1	aap 45 1438	Richard Dawkins Foundation	11,150	100
2	gurch 45 301		10,960	97
3	steveB 45 1438	Void Crushers	10,843	93
4	Enzyme 45 1438		10,816	89
5	Mark- 45 1438		10,733	86

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Comments

Thu, 10/22/2009 - 00:23

beta_helix 45 852

Offline

Joined: 05/09/2008

Groups: None

secondary structure predictions will be here... eventually!

The secondary structure sequence logo predictions are still running, but I will post them here as soon as I get them back from the SAM server.
(I think the server queue might be very long right now or something)

Thu, 10/22/2009 - 21:55

beta_helix 45 852

Offline

Joined: 05/09/2008

Groups: None

secondary structure prediction results:

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 120 is highly predicted to be part of a helix. However, the Valine at residue 110 is predicted to have an equal probability of being anything.


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