puzzle picture
206: Mini-CASP 6-Freestyle
Status: Closed

Groups

RankGroupScorePoints
1Void Crushers10,632100
2Richard Dawkins Foundation10,53478
3Russian team10,28460
4Contenders10,27846
5ExPitneyFolders10,25134
610,14326
7Another Hour Another Point10,09219
8SETI.Germany10,09114
9turkish voluntered10,03710
10Free-DC10,0227
11L'Alliance Francophone9,8095
12Team Canada9,7544
13Origami9,6852
14Rice Biochemistry9,4502
15Ukraine9,3981
16Crunching Family9,3591
17Czech National Team9,2361
18Heroines9,1481
19Catalunya8,6811
20Firebird BioChem8,5801
21the pyromaniatic amoebas8,5641
22DSN @ Home8,4311
23The NEW, Door Group8,3801
24BOINC@Poland8,1001
25Team Commonwealth7,5501


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Comments

beta_helix's picture
User offline. Last seen 2 days 14 hours ago. Offline
Joined: 05/09/2008
Groups: None
secondary structure predictions will be here!

As soon as I get the sequence logo secondary structure predictions back from the SAM server
(http://compbio.soe.ucsc.edu/SAM_T08/faq.html)
I will post them here!

beta_helix's picture
User offline. Last seen 2 days 14 hours ago. Offline
Joined: 05/09/2008
Groups: None
Secondary structure prediction results:

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 101 is highly predicted to be part of a sheet. However, the Alanine at residue 61 is predicted to have an equal probability of being anything.

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons