puzzle picture
200: Mini-CASP 4-Freestyle
Status: Closed


Name: 200: Mini-CASP 4-Freestyle
Status: Closed
Created: 09/22/2009
Points: 100
Expired: 09/29/2009 - 23:00
Difficulty: Advanced
Description: Here is the next Mini-CASP target whose solved structure will be released soon. Again we are giving you an extended chain to see what you come up with. This might be very difficult, since this blind prediction has 138 residues, so we will release a Rosetta prediction for this target later this week. Until then, good luck freestyle folding! As suggested in the feedback the secondary structure prediction is posted in the puzzle comments.

Top Groups

1Richard Dawkins Foundation10,660100
2Another Hour Another Point10,45366
3Void Crushers10,44242
4Russian team10,32826

Top Evolvers

Top Soloists

1aap 171 16033 Richard Dawkins Foundation10,660100
2MellyLam 171 16033 10,44695
3steveB 92 161 Void Crushers10,44090
4Mark- 171 16033  10,36585
5justjustin 171 190 10,28181

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Joined: 05/09/2008
Groups: None
secondary structure prediction results:

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Cysteine at residue 110 is highly predicted to be part of a helix. However, the Leucine at residue 64 is predicted to have an equal probability of being anything.

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons