|Opened on:||Thursday, January 8, 2009 - 19:01|
|Last modified:||Friday, January 6, 2012 - 01:16|
I've posted this idea on the forums at first, but Steven Pletsch suggested that this would be a better place to post it. So I did :p
I will try to summarize it a little:
The suggestion is for a new "Temperature" option while you are wiggling the protein. The user can set the temperature to either 0°K (no effect) or any other temperature he likes, which results in random forces cast on the wiggled parts. The hotter, the stronger those forces. This would automatically "nudge" proteins out of unstable folds and would replace the current nudge/wiggle/nudge/wiggle strategy.
You can read the whole idea here: