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2147: Symmetric Tetramer Design with AlphaFold Predictions
Status: Closed
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Soloists
1 | ichwilldiesennamen 24 11 | Go Science | 21,432 | 100 | 2 | Bruno Kestemont 3 3 | Go Science | 20,966 | 93 | 3 | robgee 7 10 | Anthropic Dreams | 20,917 | 86 | 4 | Galaxie 1 2 | Anthropic Dreams | 20,790 | 79 | 5 | spvincent 30 13 | Contenders | 20,669 | 73 | 6 | alcor29 5 7 | Anthropic Dreams | 20,622 | 68 | 7 | nspc 35 30 | Go Science | 20,377 | 62 | 8 | LociOiling 2 1 | Anthropic Dreams | 20,296 | 57 | 9 | dcrwheeler 46 4 | | 20,141 | 52 | 10 | gmn 4 5 | Anthropic Dreams | 19,961 | 48 | 11 | BootsMcGraw 10 9 | Contenders | 19,737 | 44 | 12 | Punzi Bake... 46 12 | | 19,662 | 40 | 13 | drumpeter18yrs9yrs 46 77 | | 19,656 | 37 | 14 | akaaka 46 17 | | 19,605 | 33 | 15 | jamiexq 38 68 | Anthropic Dreams | 19,306 | 30 | 16 | Bletchley Park 9 8 | Contenders | 19,060 | 27 | 17 | zippyc137 46 16 | | 18,738 | 25 | 18 | infjamc 28 18 | Contenders | 18,443 | 22 | 19 | Sandrix72 18 6 | | 17,946 | 20 | 20 | AlkiP0Ps 46 49 | Australia | 17,900 | 18 | 21 | MrZanav 13 59 | Anthropic Dreams | 17,725 | 16 | 22 | maithra 6 24 | Contenders | 17,620 | 15 | 23 | WBarme1234 46 26 | | 17,422 | 13 | 24 | jobo0502 46 22 | L'Alliance Francophone | 17,360 | 12 | 25 | stomjoh 46 73 | | 17,334 | 10 | Need this puzzle? Log in to download.
Comments
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Buried Unsats (max +500)
Penalizes polar atoms that cannot make hydrogen bonds, -200 points per atom (not including symmetric copies).
Core Existence: Monomer (max +2000)
Ensures that at least 20 residues are buried in the core of the monomer unit.
Core: Complex (max +0)
Awards no bonuses or penalties. Click Show to see which residues count as "Core" for the H-bond Network objective.
H-bond Network (max +2400)
Rewards networks that comprise at least 2 H-bonds involving core residues.
Between 1 and 12 H-bonds should cross the interface between symmetric units.
Networks must be at least 75% satisfied (i.e. 75% of all bondable atoms in a network must make a H-bond).
Interaction Energy (max +500)
Monitors that all large PHE, TYR, and TRP residues are scoring well.
SS Design (max +500)
Penalizes all CYS residues.
Ideal Loops (max +500)
Penalizes any loop region that does not match one of the Building Blocks in the Blueprint tool. Use "Auto Structures" to see which regions of your protein count as loops.
Secondary Structure (max +500)
No more than 50% of residues may form helices. Extra helices are penalized at 10 points per residue.
Neural Net (max +0)
Achieve an AlphaFold prediction confidence of 80% or more.