Core Existence: Monomer (max +2800)
Ensures that at least 28 residues are buried in the core of the monomer unit.
Core: Complex (max +0)
Awards no bonuses or penalties. Click Show to see which residues count as "Core" for the H-bond Network objective.
H-bond Network (max +2400)
Rewards networks that comprise at least two H-bonds involving core residues.
Between 1 and 12 H-bonds should cross the interface between symmetric units.
Networks must be at least 75% satisfied (i.e. 75% of all bondable atoms in a network must make a H-bond).
SS Design (max +500)
Penalizes all CYS residues. Penalizes GLY, ALA residues in sheets. Penalizes GLY, ALA in helices.
Ideal Loops (max +500)
Penalizes any loop region that does not match one of the Building Blocks in the Blueprint tool. Use "Auto Structures" to see which regions of your protein count as loops.
A few comments about using the blueprint tool on symmetry puzzles.
[15:50] HI. Is blueprint acting up? Lately the inserts seem to resist pasting into the matrix.
[16:37]<@MikeCassidytoo> I didnt have trouble yesterday
[17:53] @alcor29: turn off Show Symmetric Chains
[18:01] Thanks spvincent.
[18:01] yw. (vakobo found that one)
[18:02] good catch