puzzle picture
1755: Symmetric Trimer Design: 60 Residues
Status: Closed

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3Contenders17,09447
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6Marvin's bunch16,52711
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9L'Alliance Francophone16,3062
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11BOINC@Poland14,2871
12Italiani Al Lavoro13,8851
13Trinity Biology10,6941
14FoldIt@Netherlands10,3801
15Rechenkraft.net7051


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Comments

bkoep's picture
User offline. Last seen 1 day 2 hours ago. Offline
Joined: 11/15/2012
Groups: None
Objectives

Core Existence: Monomer (max +1600)
Ensures that at least 16 residues are buried in the core of the monomer unit.

Core Limit: Complex (max +500)
Checks that no more than 60 residues are buried in the symmetric complex, including the interface between monomer units.

SS Design (max +500)
Penalizes all CYS residues. Penalizes GLY, ALA residues in sheets. Penalizes GLY, ALA, SER, THR in helices.

Ideal Loops (max +500)
Penalizes any loop region that does not match one of the Building Blocks in the Blueprint tool. Use "Auto Structures" to see which regions of your protein count as loops.

Joined: 06/24/2008
Groups: Void Crushers
Core Complex

So far I have not been able to get over 350.

Joined: 06/24/2008
Groups: Void Crushers
Got it to work

though strange

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons