Suggestion for network puzzles

Case number:699969-2005529
Topic:General
Opened by:NinjaGreg
Status:Open
Type:Suggestion
Opened on:Monday, July 23, 2018 - 19:27
Last modified:Monday, August 27, 2018 - 23:53

Make wiggle try to retain any existing networks, like it does for cysteine bridges.

(Mon, 07/23/2018 - 19:27  |  4 comments)


jeff101's picture
User offline. Last seen 8 hours 19 min ago. Offline
Joined: 04/20/2012
Groups: Go Science

If you know which residues are in the network,
you can use recipes like Loop rebuild 9.0a
(https://fold.it/portal/recipe/102557)
to protect those residues from being mutated.

You can also put bands on key residues to
protect their networks. bandsome can do this
(https://fold.it/portal/recipe/43861).

NinjaGreg's picture
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Groups: Go Science

Yes, there are workarounds, but it seemed like any band I put on when I had a network made it go away. Pretty frustrating.

NinjaGreg's picture
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One of the issues is that when a band is in place, one can't tell if the bond is still active, or if it has gone away. It needs to be able to "glow through" the band.

jeff101's picture
User offline. Last seen 8 hours 19 min ago. Offline
Joined: 04/20/2012
Groups: Go Science

Suggestions for Contact Map and Translucent Bands
https://fold.it/portal/node/2003554

Let users make bands invisible
https://fold.it/portal/node/993644

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