puzzle picture
1262: Revisiting Puzzle 62: Halorhodopsin
Status: Closed

Summary

Name: 1262: Revisiting Puzzle 62: Halorhodopsin
Status: Closed
Created: 07/19/2016
Points: 100
Expired: 07/27/2016 - 23:00
Difficulty: Intermediate
Description: This is a throwback puzzle to the early days of Foldit. This protein is able to absorb light and use the energy to transfer chloride ions across the cell membrane. We are revisiting old Foldit puzzles so we can see how useful the recent additions to the game have been.

Sequence:
RENALLSSSLWVNVALAGIAILVFVYMGRTIRPGRPRLIWGATLMIPLVSISSYLGLLSGLTVGMIEMPAGHALAGEMVRSQWGRYLTWALSTPMILLALGLLADVDLGSLFTVIAADIGMCVTGLAAAMTTSALLFRWAFYAISCAFFVVVLSALVTDWAASASSAGTAEIFDTLRVLTVVLWLGYPIVWAVGVEGLALVQSVGATSWAYSVLDVFAKYVFAFILLRWVANNERTVAV
Categories: Overall, Prediction

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RankGroupScorePoints
1Anthropic Dreams12,109100
2Beta Folders12,09474
3Go Science12,05954
4Contenders12,05738
5L'Alliance Francophone11,85627

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Comments

toshiue's picture
User offline. Last seen 1 week 3 days ago. Offline
Joined: 01/31/2016
Groups: Go Science
RaptorX U of Chicago predicted model

Predicted 3D models assisted by predicted contacts, and predicted contact map ... fwiw
http://raptorx2.uchicago.edu/ContactMap/myjobs/74298828_105939/

toshiue's picture
User offline. Last seen 1 week 3 days ago. Offline
Joined: 01/31/2016
Groups: Go Science
oops, sorry....please ignore #1, posted the wrong sequence

Sorry folks, please ignore #1 above, I posted the wrong sequence.

toshiue's picture
User offline. Last seen 1 week 3 days ago. Offline
Joined: 01/31/2016
Groups: Go Science
Corrected RaptorX prediction set for 1262

Predicted 3D models assisted by predicted contacts, and predicted contact map for 1262 ... fwiw
http://raptorx2.uchicago.edu/ContactMap/myjobs/22880727_106466/

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons