1221 crashing

Case number:954892-2002319
Topic:Developer Preview
Opened by:alcor29
Status:Open
Type:Bug
Opened on:Monday, April 18, 2016 - 21:00
Last modified:Tuesday, April 26, 2016 - 16:13

Was doing fine till tried to bring up the ED cloud. Crashed, and have crashed 7 times since. Unable to get back into 1221 puzzle. Win10, 64. Main.

ending SOPs:

has key .odensity
has key .owts
has key .params
has key .2.params
has key .opdb
has key .opuzzle_setup
has key .ocnstr
starting score : 7164.54
puzzle loaded
[0mWarning: [0mUnable to locate database file chemical/gasteiger/default/atom_type_data.txt
[0m[1m[31m
ERROR: Unable to open gasteiger atom type file: cmp-database-45bbcddcbd4174e67b82569775fde821\database\chemical/gasteiger/default/atom_type_data.txt
ERROR:: Exit from: ..\..\..\source\src\core\chemical\gasteiger\GasteigerAtomTypeSet.cc line: 58
[0m
UNHANDLED EXCEPTION
1: RaiseException +72 bytes (no line)
2: library_main +46809519 bytes (no line)
3: library_main +44830496 bytes (no line)
4: library_main +44218969 bytes (no line)
5: library_main +42812450 bytes (no line)
6: library_main +4279842 bytes (no line)
7: library_main +4138407 bytes (no line)
8: library_main +3254560 bytes (no line)
9: library_main +3251722 bytes (no line)
10: library_main +407818 bytes (no line)
11: library_main +663143 bytes (no line)
12: library_main +3310807 bytes (no line)
13: library_main +3386333 bytes (no line)
14: library_main +678689 bytes (no line)
15: library_main +669633 bytes (no line)
16: library_main +479875 bytes (no line)
17: library_main +660499 bytes (no line)
18: library_main +404801 bytes (no line)
19: library_main +3183380 bytes (no line)
20: library_main +404801 bytes (no line)
21: library_main +4521621 bytes (no line)
22: library_main +4522330 bytes (no line)
23: library_main +5216962 bytes (no line)
24: library_main +4685104 bytes (no line)
25: library_main +6288507 bytes (no line)
26: library_main +4684270 bytes (no line)
27: library_main +6293689 bytes (no line)
28: library_main +6283206 bytes (no line)
29: SetManipulationInputTarget +83 bytes (no line)
30: CallWindowProcW +768 bytes (no line)
31: CallWindowProcW +151 bytes (no line)
32: glDebugEntry +3763 bytes (no line)
33: SetManipulationInputTarget +83 bytes (no line)
34: CallWindowProcW +768 bytes (no line)
35: DispatchMessageW +593 bytes (no line)
36: DispatchMessageA +16 bytes (no line)
37: library_main +6291925 bytes (no line)
38: library_main +4003108 bytes (no line)
39: library_main +29675 bytes (no line)
40: library_main +21 bytes (no line)
41: no symbol (no line)
42: no symbol (no line)
43: no symbol (no line)
44: BaseThreadInitThunk +36 bytes (no line)
45: RtlUnicodeStringToInteger +595 bytes (no line)
46: RtlUnicodeStringToInteger +542 bytes (no line)

(Mon, 04/18/2016 - 21:00  |  13 comments)


alcor29's picture
User offline. Last seen 38 min 41 sec ago. Offline
Joined: 11/16/2012
Type: Suggestion » Bug

Changed to BUG.

jamiexq's picture
User offline. Last seen 18 hours 45 min ago. Offline
Joined: 07/31/2011

was able to play puzzle until servers crashed at Foldit - now puzzle will not open in main or devprev on win 7 - see puzzle comments

Madde's picture
User offline. Last seen 19 weeks 2 days ago. Offline
Joined: 05/29/2008
Groups: Void Crushers

Tried to open 1221 for the first time on a freshly updated client (devprev) on Win10-64bit, crashed immediately.
Full log.txt:

args passed:
'C:\Foldit\Foldit.exe'
starting the init thread!..
boinc base url: https://fold.it
checking updates...
binary
local: 'c2642c6c2819dc6eb1eccc7dfce6539b'
remote: 'c2642c6c2819dc6eb1eccc7dfce6539b'
database
local: '45bbcddcbd4174e67b82569775fde821'
remote: '45bbcddcbd4174e67b82569775fde821'
resources
local: 'f3f5689675a05a73fb3d5d1f6e8950e6'
remote: 'f3f5689675a05a73fb3d5d1f6e8950e6'
cleaning up old components:
binary 00000000000000000000000000000000
binary 1cdb28e9829f1a2d0370c849bc88ffb1
Removing...
binary c2642c6c2819dc6eb1eccc7dfce6539b
database 45bbcddcbd4174e67b82569775fde821
resources 00000000000000000000000000000000
resources f3f5689675a05a73fb3d5d1f6e8950e6
CRASH: 42629
SoundTheme::load: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_00.ogg
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_01.ogg
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_02.ogg
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_03.ogg
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_04.ogg
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_05.ogg
SVM classifier successfully loaded
Feature list successfully loaded
Valid classifier feature list
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue LEU:CtermProteinFull 21
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue GLU:CtermProteinFull 21
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue LYS:CtermProteinFull 21
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ARG:CtermProteinFull 21
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ASP:CtermProteinFull 21
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue LEU:CtermProteinFull 17
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue THR:CtermProteinFull 16
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue VAL:CtermProteinFull 17
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ARG:CtermProteinFull 17
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue LYS:CtermProteinFull 16
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ASN:CtermProteinFull 16
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue GLU:CtermProteinFull 16
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ASP:CtermProteinFull 13
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ARG:CtermProteinFull 12
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue GLU:CtermProteinFull 12
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ASN:CtermProteinFull 12
buildid: 20160331-69bf47620a-win_x86-devprev
about to create view_options_button_
Duplicate hotkey Shift+L (Show outlines, )
setting side chain mode to: 0 Don't Show (Fast)
Playing: sounds/organic_01/splashscreen.ogg
Converting any old-style quicksaves and autosaves...
Reading in vall_torsions file: cmp-database-45bbcddcbd4174e67b82569775fde821\database\sampling/rna/1jj2.torsions
Lines read from vall_torsions file: 2754
Sending SOPs:

Sending SOPs:

About to show the puzzle screen...
Trying to get the puzzle list...
Loading cache...
Parsing puzzle URL...
Parsing contests...
Parsing macros...
Saving the cache...
Parsing level completion...
Sending SOPs:

Initting the list...
Got the puzzles...
Sending SOPs:

Finished show_puzzle_screen...
downloading: http://fold.it/portal/files/puzzle_pdb/puzzle_post_1250.zip
has key .odensity
has key .owts
has key .params
has key .2.params
has key .opdb
has key .opuzzle_setup
has key .ocnstr
starting score : 7164.54
puzzle loaded
GROUP CHAT CHANNEL: VoidCrushers
set up new density...
updating surface...
ScorePanel new session
BOINC says connect to: 128.95.1.227:6665
Using nick: Madde
Ended Initialization of NoviceGame
SRVR_THRD getting notifications...
Entering IRC::run
Sending SOPs:

IRC::run error, code = 5, desc = Remote connection closed
Exiting IRC::run
SRVR_THRD getting notifications...
Sending SOPs:

SRVR_THRD getting notifications...
Sending SOPs:

Sending SOPs:

SRVR_THRD getting notifications...
Sending SOPs:

SRVR_THRD getting notifications...
updating surface...

Joined: 05/19/2009
Groups: Contenders

On 20160331-69bf47620a-win_x86-devprev

Problem signature:
Problem Event Name: APPCRASH
Application Name: Foldit.exe
Application Version: 0.0.0.0
Application Timestamp: 546d537b
Fault Module Name: KERNELBASE.dll
Fault Module Version: 6.1.7601.18409
Fault Module Timestamp: 53159a86
Exception Code: e06d7363
Exception Offset: 0000c42d
OS Version: 6.1.7601.2.1.0.256.48
Locale ID: 1043
Additional Information 1: 0a9e
Additional Information 2: 0a9e372d3b4ad19135b953a78882e789
Additional Information 3: 0a9e
Additional Information 4: 0a9e372d3b4ad19135b953a78882e789

LociOiling's picture
User offline. Last seen 23 min 14 sec ago. Offline
Joined: 12/27/2012
Groups: Beta Folders

Not sure if this is of interest, but as the attached (slightly redacted) image shows, procmon revealed some odd behavior as a client crashed trying to save a solution to 1221.

Near the top of the image, there lots of "NAME NOT FOUND" errors on various attempts at creating "wkscli.pdb" and "srvcli.pdb". The path does exist, it the foldit directory for this client. The names include things like "AudioSes.pdb", and "midimap.pdb". Some are in the foldit install directory, some are one level down in the non-existent "dll" sub-directory. There were a total of 835 CreateFiles with "NAME NOT FOUND" or "PATH NOT FOUND" at this point.

Then it writes lines to log.txt, I'm assuming this is the stack trace shown below based on the length.

Then it does a QueryNameInformationFile on foldit.exe, which succeeds. After that, there are a bunch of QueryNameInformationFile calls which fail due to buffer overflow. It seems like this might be a ZwQueryInformationFile call (?) that's failing, looks like the size of its output buffer has incorrectly been set to 6.

I have a saved procmon log available if that of interest.

The last lines of log.txt attached below. The last two lines are 53 bytes long if you add CR/LFs, so I think that's what the procmon output is showing.

puzzle loaded
[0mWarning: [0mUnable to locate database file chemical/gasteiger/default/atom_type_data.txt
[0m[1m[31m
ERROR: Unable to open gasteiger atom type file: cmp-database-45bbcddcbd4174e67b82569775fde821\database\chemical/gasteiger/default/atom_type_data.txt
ERROR:: Exit from: ..\..\..\source\src\core\chemical\gasteiger\GasteigerAtomTypeSet.cc line: 58
[0m
UNHANDLED EXCEPTION
1: RaiseException +72 bytes (no line)
2: library_main +46809519 bytes (no line)
3: library_main +44830496 bytes (no line)
4: library_main +44218969 bytes (no line)
5: library_main +42812450 bytes (no line)
6: library_main +4279842 bytes (no line)
7: library_main +4138407 bytes (no line)
8: library_main +3254560 bytes (no line)
9: library_main +3251722 bytes (no line)
10: library_main +407818 bytes (no line)
11: library_main +663143 bytes (no line)
12: library_main +3310807 bytes (no line)
13: library_main +3386333 bytes (no line)
14: library_main +678689 bytes (no line)
15: library_main +669633 bytes (no line)
16: library_main +479875 bytes (no line)
17: library_main +861729 bytes (no line)
18: library_main +549791 bytes (no line)
19: library_main +404801 bytes (no line)
20: library_main +4356837 bytes (no line)
21: library_main +4357291 bytes (no line)
22: BaseThreadInitThunk +36 bytes (no line)
23: RtlUnicodeStringToInteger +595 bytes (no line)
24: RtlUnicodeStringToInteger +542 bytes (no line)

eromana's picture
User offline. Last seen 9 weeks 1 day ago. Offline
Joined: 02/16/2013
Groups: Gargleblasters

I am up voting this posting because like the tittle brief and accurate. Fist of all kudos to the developers of the 1221 Foldit puzzle - awesome!. 1221 manages to crash on every PC machine and OS that I have. On Linux PC towers it crashes on Nvidia and AMD and ATI video cards with very many combinations of Linux kernels and device driver modules for both the Linux Wine Windows and the Linux native Foldit software releases. It crashes my Linux laptop with an Intel video chip, It crashes on Windows 7. In short puzzle 1221 challenges all my PC Software. Unfortunately I do not have a Mac OSX machine to play this puzzle.

Joined: 04/24/2014
Groups: None

Thanks for the report! We appreciate the feedback, and while logs would be generally a little more helpful as we try to narrow down what exactly in this puzzle is being so problematic, even a little bit of information is good to go on. Sorry you had so much trouble with 1221!

Merf's picture
User offline. Last seen 20 hours 44 min ago. Offline
Joined: 01/01/2010
Groups: None

There seems to me to be very little point
reducing the points score to zero and removing
the ranking facility if one is unable to load and play!
I have given up trying. As the school report might say,
"could do better"

Joined: 04/24/2014
Groups: None

http://fold.it/portal/node/2002315#comment-32266 I think I hit a some of the points you're concerned about in this post. Thanks for the feedback!

Madde's picture
User offline. Last seen 19 weeks 2 days ago. Offline
Joined: 05/29/2008
Groups: Void Crushers

Another attempt: started a new client (and one only) on Win10-64bit, i7-4770@3.4GHz, 16GB RAM for p1221.
Didn't even see the protein:



















Full log.txt:

args passed:
'C:\Foldit\Foldit.exe'
starting the init thread!..
boinc base url: https://fold.it
checking updates...
binary
local: 'c2642c6c2819dc6eb1eccc7dfce6539b'
remote: 'c2642c6c2819dc6eb1eccc7dfce6539b'
database
local: '45bbcddcbd4174e67b82569775fde821'
remote: '45bbcddcbd4174e67b82569775fde821'
resources
local: 'f3f5689675a05a73fb3d5d1f6e8950e6'
remote: 'f3f5689675a05a73fb3d5d1f6e8950e6'
cleaning up old components:
binary 00000000000000000000000000000000
binary c2642c6c2819dc6eb1eccc7dfce6539b
database 45bbcddcbd4174e67b82569775fde821
resources 00000000000000000000000000000000
resources f3f5689675a05a73fb3d5d1f6e8950e6
CRASH: 42629
SoundTheme::load: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_00.ogg
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_01.ogg
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_02.ogg
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_03.ogg
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_04.ogg
loading: cmp-resources-f3f5689675a05a73fb3d5d1f6e8950e6\resources\sounds/organic_01/rotamer_land_05.ogg
SVM classifier successfully loaded
Feature list successfully loaded
Valid classifier feature list
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue LEU:CtermProteinFull 21
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue GLU:CtermProteinFull 21
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue LYS:CtermProteinFull 21
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ARG:CtermProteinFull 21
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ASP:CtermProteinFull 21
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue LEU:CtermProteinFull 17
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue THR:CtermProteinFull 16
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue VAL:CtermProteinFull 17
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ARG:CtermProteinFull 17
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue LYS:CtermProteinFull 16
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ASN:CtermProteinFull 16
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue GLU:CtermProteinFull 16
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ASP:CtermProteinFull 13
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ARG:CtermProteinFull 12
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue GLU:CtermProteinFull 12
[0mcore.conformation.Conformation: [0m[ WARNING ] missing heavyatom: OXT on residue ASN:CtermProteinFull 12
buildid: 20160331-69bf47620a-win_x86-devprev
about to create view_options_button_
Duplicate hotkey Shift+L (Show outlines, )
setting side chain mode to: 0 Don't Show (Fast)
Playing: sounds/organic_01/splashscreen.ogg
Converting any old-style quicksaves and autosaves...
Reading in vall_torsions file: cmp-database-45bbcddcbd4174e67b82569775fde821\database\sampling/rna/1jj2.torsions
Lines read from vall_torsions file: 2754
Sending SOPs:

Sending SOPs:

About to show the puzzle screen...
Trying to get the puzzle list...
Loading cache...
Parsing puzzle URL...
Parsing contests...
Parsing macros...
Saving the cache...
Parsing level completion...
Sending SOPs:

Initting the list...
Got the puzzles...
Sending SOPs:

Finished show_puzzle_screen...
has key .odensity
has key .owts
has key .params
has key .2.params
has key .opdb
has key .opuzzle_setup
has key .ocnstr
starting score : 7164.54
puzzle loaded
[0mWarning: [0mUnable to locate database file chemical/gasteiger/default/atom_type_data.txt
[0m[1m[31m
ERROR: Unable to open gasteiger atom type file: cmp-database-45bbcddcbd4174e67b82569775fde821\database\chemical/gasteiger/default/atom_type_data.txt
ERROR:: Exit from: ..\..\..\source\src\core\chemical\gasteiger\GasteigerAtomTypeSet.cc line: 58
[0m

LociOiling's picture
User offline. Last seen 23 min 14 sec ago. Offline
Joined: 12/27/2012
Groups: Beta Folders

On that "gasteiger error", the path to the file is:

cmp-database-45bbcddcbd4174e67b82569775fde821\database\chemical/gasteiger/default/atom_type_data.txt

Some observations:

  1. There is no "gasteiger" directory on my install, with database 45bbcddcbd4174e67b82569775fde821; also no file "atom_type_data.txt"
  2. Interesting how the log message combines back slashes with with forward slashes
  3. Why have a "cmp-database" directory with a single sub-directory "database"? (Seems like everything could move up a level.)
bertro's picture
User offline. Last seen 7 weeks 3 days ago. Offline
Joined: 05/02/2011
Groups: Beta Folders

With latest devprev, I was able to load a quicksave3.ir_solution but the score is -999999.999 whatever I do. And some artifacts have really bad clashing score like the screenshot attached here.

Joined: 09/24/2012
Groups: Go Science
Topic: General » Developer Preview

same to me, able to load old saves, but with the same score problem

Sitemap

Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons